Oncorhynchus keta (chum salmon): 118362256
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Entry
118362256 CDS
T09424
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118362256 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Cadherin related
118362256 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_pro
EGF
hEGF
Laminin_G_3
cEGF
Big_9
Motif
Other DBs
NCBI-GeneID:
118362256
NCBI-ProteinID:
XP_052336346
LinkDB
All DBs
Position
2:complement(63729952..63969531)
Genome browser
AA seq
2897 aa
AA seq
DB search
MIWTILICYFVTPVLGNKTEERIPFFHGHVFENSEPGSKVNGLSIPVKRVDAQRWCSNSG
MHLKLLGDGSKDFNVFAHHKRGHILLKTSIVLDREERSEYLLSLGLCCQSCATTDLVVAE
VASVKVDVLDTNDHEPTFPNADIKINLDDATALRSVVYKVTAEDTDHGKNAELIYFALPK
NGSFYVVPKTGDVLLVDSILGLTAPIKLNVFAMDHGWPSRTSQSIEIEINPRQWPAVRQP
SQGEPKIRLPRKSRSLLESDEPVVINVSEDASIGSVVVNLYPVRFQAASFELMDPGADNS
PVTVSRDSGDIVITRRLDRETDPLVEITVKVQDKRGPDWYLVRVELTVTDVNDNVPEWTM
VPSPYLAVVSPNALAGSLVYKLHAQDGDEGNNGEVEYFLSDGGDGRFEVDRKNGHVRTTG
LPLQRDKEYLLTVVAADRLGSRSPPVVVSVIAGARAPQFSNASFTISLPENTPEGQPFLA
TPAVSFQKQPISYSLLINPSSLFSMQADTGEITLTRTIDFEMDQHSFLLMVRASEDQDSL
SSAAEVRVIITDENDCVPEFLQSIYSKDSVPETVTTATSLLQVSASDCDSDLNAELSYYT
LSPDFSISPHGTIFPAGQLDYERPNHLYEFVVMAVDKGDVPRTGTATVRIRMANVNDEVP
EFSQHVYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITTGNDEGNFVIDSQKGLIRLRS
SPPPRLQGVEYILNVTATDDNASGGPQALSSTARVIVGVDDVNNNKPVFGKCQQYRERTT
VLENQSAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSIHPDTGVIVTSRKFDRER
QREYAVTVTATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRV
AAHDDDYSTNAAVTYSMSKEQPEYLRVNPLTGWVYVNQPISQRTYITREIVATDGGNRSS
SVELSVTITNVKNQPPQWDRDSFDVVIPENTVRDTPIVTIKATSPLGDPRVTYNLEDGMV
PETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAFTTVHLNI
TDVNDNVPFFTSSIYEASVTEGAAVGTFVTQVSSNDLDLGLNGKISYSLLNDRSGDYQYF
RIDPELGSIYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRVFISDVND
NKPVFAQTVYEVDVDEDADVGFAILTVSANDEDEGANAKLRYQITSGNTGGVFDVEPEVG
TIFIAQPLDYERNKGYKLLVLASDGKWEDYADVMVNVVNKNDEAPVFTVNEYYGSVTEEL
DGSPVFVLQVTATDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLNREERAVW
RFVVLATDEGGEGLTGFTDIIINVWDINDNAPIFTCAPNCHGNVPENSAPGTSVMEMTAT
DLDDSAVGQNAVLSYRIVGNAGTGGGGSDMFSINPSTGTISVAMSGLDREQAETYLLMVE
ARDGGGMMGTGTATIRVTDVNDHAPRFTERSCLARVPESSEPNAVVLELSAEDWDTGENA
QLTFSVVAGDPEQKFSMVSQRQEQRGTLRLKKRLDYERPSEQRFNLTLKVEDLDFSSFIH
CVVEVEDCNDHAPIFIALSQPPAPLPEDVPVGSSVARLTASDSDSGQNKEITYKILQESD
PLGQFSVDQSGLVTVTSALDRETAAQHNLVVLASDHGSPALTGSATIQLALLDVNDNGPE
FEAMYTPVVWENVSGPQLVRLNQTSTLLRAVDRDSAENGSPFYFSLPLELHHSNDFYLQD
NGNGTATITALRAFDRERQKEFLLQIIMSDSGHPPKTVTNTLTITIGDENDHAHQAGEKE
IFVNSHRGRMPTTVLGKVYAPDPDDWDNKTYAFDGHVPNYFILNKRTGFLIIKENTPPGS
YEFQVCVSDGVWPDAVSGVTVYVRELRDEAIYNSGSLRLADVTAKEFIEQRGSLRSRYEL
LVDFLSEMLAVGVDDINVFSLMDVRERTLDVRFAVHSSPFLRAERLQGYLAAHKQKLQSF
LQVNISQVHVDECANTDCGGSGGCSNVLSVSDTPTVVDSGSLSLVSVTVESTAVCSCSGR
EHVHKICSSYPRNPCFNGGICVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPIR
PCFESRLSLEFITEVADGLLLYSGPLAQLQPWDLEDFMAIELIDGTPTLKINHGSGTLVL
QLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCAGATVMEMEGVGSWLTTEDHSSCEVTGV
TPNLDRHLNGTQVLQLGGVNEDLPYVYPQLQHKHFTGCIRNLVVDSKFYDLGTPADSVGS
SPGCLTTDGSCVNVGIPSCGPRGRCHGEWGSFSCQCIPGYTGNQCEHEVPEYSFDGRSHV
HYQLASPLPARRTQVQVLVRTRKHGSAILSLLSKEQTEYLRLEIYQGLLAVFYNLGDGDY
NLTLPSYRLDNGEWHEVYLDRHDNELTLRLDGGGGRRETSAAPSRSREIITDPAVVMLGN
AFPSGSNKSFQGCIRDLRLNGRYVPLDGLSRDGVSVVSSQGLSLGCSSDSCKRNQCSPPF
TCVDLWRVHECRCPPGHMVKLNGTGKVCIYTLCASRPCHRGTCLAQSPSKFTCHCPEGYR
GRHCEVALAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSA
HHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRTRAIHQHHHPH
TQHQQPQDTLSRLGASTAPSSFTTTLRRDVPPIRSLAQGQSRPLLLARKSLSFSSQDLAR
YLCEIIRDADQAPESAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEDTARGQDSLKDWGP
RFEKLKALYEKTEASDL
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgatttggactattttaatatgctatttcgtgacacctgtacttgggaataagacagag
gaaaggataccgttctttcatggacatgtattcgagaactccgagccgggatccaaagta
aacggtctcagcatccctgtgaagcgggttgacgcgcagagatggtgctccaactccggc
atgcatctgaaactcttgggagacggaagtaaagatttcaatgtatttgcccaccacaaa
cgcggacacatacttctgaaaacctcgatcgtcctggacagagaggagcgctccgagtac
ttgctcagcctgggtctgtgctgccaaagctgcgccaccactgaccttgtggtcgcagaa
gttgcatctgtgaaagtggacgttttggacactaatgaccacgagccaacattccctaat
gctgatataaaaattaatctggacgacgccactgctctgcggtctgtggtgtataaagtg
accgcggaggatacagaccacgggaaaaacgctgaactcatttactttgctcttcccaaa
aatggcagtttctacgtcgttccaaaaactggagatgtactgcttgtggactctatattg
ggtcttaccgcccccataaagttgaacgtgtttgcgatggaccacggttggccctcacgg
accagtcagagtattgaaatagagattaatccccggcaatggccagcggttcgacagcca
tcccagggcgaaccgaaaatcagactacctcggaagtcgaggtccctgctagagtctgac
gagccggttgtaataaatgtttccgaggatgccagtatcggttctgttgtagtgaactta
tacccagtgaggtttcaggctgccagctttgagttgatggatcccggtgcggacaactca
ccggtcacggtgagtcgggacagcggagatatagtaattacacggcgcctggaccgggag
acggatcctctcgtggagattactgtgaaagttcaggataaaagaggtccagactggtac
ctggtacgggtggagctgacggtgactgatgtgaatgacaatgttccggaatggaccatg
gttccctccccctacctggcagtggtatctcccaacgccctggccgggtcactggtctac
aagctccacgcccaggacggagacgagggcaacaacggagaggtggaatacttcctgtct
gatggcggtgacgggcgtttcgaggtggacagaaagaatggtcatgtccggactacgggg
ctgccacttcagagggacaaagagtacctgttgacagtggtggctgctgaccggctgggt
agccgtagtcccccggtggtagtgtcagtcatcgcaggagccagagcgccacagttctcc
aacgcatcctttactatttcactacctgagaacacaccagagggacagcccttcctggca
actccagccgtgtccttccagaagcagccaatcagctacagcctgctcatcaatcccagc
agtctgttcagcatgcaggcggacacgggggagataactctgaccaggaccatagacttt
gagatggaccagcacagcttcctgctcatggtcagggccagcgaggaccaggacagtctg
agcagtgctgctgaggtacgtgtgatcatcacagatgaaaatgactgcgttcctgagttc
ctgcagtccatttacagcaaagacagtgtgccggagactgtaaccacggcaacctctctg
ttacaagtgtctgccagtgactgtgactcggacctgaacgcagagttatcctactacact
ctgagcccagacttcagcatctctccccacggcaccattttccctgcagggcagctggac
tatgagaggcccaaccacctgtatgagtttgtggtgatggctgtggacaagggagatgtg
ccccggacaggtacagccaccgtacgcatccgcatggccaatgtcaacgacgaggtcccc
gagttctcccagcatgtctaccggaccttcgtctcagaggacgctgggcctaacacactg
gttgccacggtgcttgccaaggaccccgacggtgatggaatcacctacaaaatcacaacg
ggcaacgacgaaggcaactttgttatcgacagccagaaaggtctgatccggctgcgctcc
agcccacctcccagactccagggggtagagtacatcctgaacgtcacagcgaccgatgac
aacgcctctggtggcccccaggccctctcatccaccgcccgggtcatcgtcggcgtggac
gacgtcaacaacaacaaacctgtctttgggaagtgccagcagtaccgggagcggacaacg
gtgctggagaaccagtctgcgggaacgttcgtcctccaggtccacgccgtggatgcagac
gagggctccaatgggagagtcacctatggattcatgcacaaagacagcactgtgcctgcc
ttcagtatccacccagacacaggtgtgatagtgacgtccaggaagtttgaccgcgagcgt
cagcgggagtacgcggtgacggtgaccgccacggaccaggcagcagaccccctcataggg
atctgtcagctcaacatcctcattctcgacgagaatgacaacagccccaagtttgagaac
ctacgctatgagtacttcctacgggaggacacaatgattggcaccagtttcctgcgtgtg
gcggcccacgacgatgactacagcaccaatgccgccgtcacctactccatgtctaaagaa
cagccagagtacctgagggtgaaccccctaaccggctgggtctacgtcaaccagcccatc
tcacagaggacctacatcacccgggagatagttgccacggacggggggaaccggagcagt
tcggtggagctgtccgtcaccatcaccaacgtgaagaaccagcctccgcagtgggacagg
gacagctttgacgtggtcatcccggagaataccgtcagggacacacccatagtgactatc
aaggccacctctccgctgggggaccctagagtgacctataacctggaggatgggatggtg
ccggagaccaacatgcctgtacgcttctatctgacccctaaccgtgaggacggctctgcc
tccatcctggtggctgagcccctggactatgagaccaccaggaacttcatactgagggtc
cgggctcagaatgtggctgcagtccctctggctgcgttcactacggtccatctgaacatc
acagatgtgaacgacaatgttcccttcttcacctcctccatctacgaggcgtcggtcaca
gagggggcggcggtggggacgtttgtcacgcaggtgtcatccaacgacctggacctggga
ctcaacggaaagatctcctactccctgctaaacgaccgcagtggggactaccagtacttc
cggattgatcctgagctgggctccatctacacagaggctgtgtttgaccgtgagaccaaa
ggctcctacctgctggaggtcaagtcagtggacggctgggagtcagcacggcccgggaaa
catggacagcccaactcagacacggcgtacgtgagggttttcatcagcgatgtgaacgat
aacaagcctgtctttgctcagacggtgtatgaagtcgacgtggatgaggatgcagacgtg
ggctttgccatcctcactgtcagtgctaatgacgaggatgaaggcgccaatgctaagctg
cgctaccagatcacgtctggcaacactggcggggtttttgacgtggaaccagaggtgggc
accatcttcatcgcccagcctctggactacgagcggaacaagggctacaagctgctggtg
ctggcgtcggacgggaagtgggaggactatgcggatgtgatggtcaacgtggtcaataag
aacgacgaggcgccagtgttcacggtcaacgagtactacggctctgtgactgaagagctg
gatggatcgcctgtgttcgtgcttcaggtaactgctactgacccagataaggatgctgac
caggaggccctgcggtactccctccatggccagggagccgagagcgagttcattattgat
gaggtgacggggaagatctacgctcagaggactctgaaccgggaggagcgggccgtgtgg
aggtttgtggtccttgccacagatgagggcggcgagggtctgaccggattcactgacatc
atcatcaacgtgtgggacatcaacgacaacgcgcccatcttcacctgcgcccccaattgt
catggcaacgtgccggagaactctgcccccggcacctctgtcatggagatgacggccacc
gacctggatgactcggccgtgggccagaacgctgtgctgtcctacaggattgtgggtaat
gcgggtacaggtggcggcggctctgacatgttcagcattaacccttccacgggcaccatc
tcggtggcaatgagtggcctggaccgggagcaggcagagacctacctgctgatggtggag
gccagggatgggggtggcatgatgggcacgggtaccgccaccatcagggtgacagatgtg
aatgaccacgcacccaggttcacggagcgatcctgcctcgccagggttcctgagagcagt
gagcccaacgcggtggtgctggagctgtctgctgaggactgggacacaggcgagaacgcc
cagctcacattcagtgtggtggcaggagacccagagcagaagttttccatggtgagccaa
cggcaggagcagcgtggcaccctgaggctgaagaagaggctggactacgagaggcccagt
gagcagcgcttcaacctcaccctgaaggtcgaagatctggacttctccagctttatccac
tgtgtcgtagaggtagaggactgtaacgaccacgctcccatcttcatcgcgctctcccag
ccgccagcgcccctgcccgaggatgtgcccgtgggcagcagcgtggccaggttgacggcc
agcgactctgactcaggccaaaacaaggagatcacctacaaaatcctccaggagtcagat
cctctgggccagttctctgtagaccagtctggtctagtcactgtgaccagcgctctggac
agagagacagcagcgcaacacaacctggtcgtcctggcttctgaccatggctctccggcc
ttgacgggcagcgccaccattcagctggccctgctggacgtgaacgacaacgggccggag
tttgaggcaatgtacactccagtggtgtgggagaacgtctctggtccacagctggtcaga
ctcaaccagacttccacactgctgcgggccgtagaccgagactcagcggagaacggatct
ccattctacttcagccttcccttagagctacaccacagcaacgacttctacctgcaggat
aacggaaacggcacggccaccatcacagccctgagggccttcgaccgggagaggcagaaa
gagttcctcctacagatcatcatgagtgacagcggccatccacccaagacggtcaccaac
actctgaccatcaccataggagacgagaacgaccatgctcaccaggcgggagagaaggag
atttttgtcaacagtcacagagggaggatgccgaccactgtcctggggaaggtctacgcc
ccggatcctgatgattgggacaacaagacctatgcctttgacggacatgtgcccaattac
ttcatcctgaacaagcggacgggattcctgatcattaaggagaacactcccccgggcagt
tacgagtttcaggtgtgcgtgtcagacggcgtgtggccagacgccgtctccggggtaaca
gtgtatgtgagggagctgcgcgacgaggccatctacaattctggatccctgcgcctggca
gacgtcacagcgaaggagtttattgagcagcgtggtagcttgaggagtcgctatgaactg
ctggtggacttcctgtcagagatgttggcggtgggcgttgatgacatcaacgtcttcagc
ctgatggacgtcagggagaggacactggacgtgcgcttcgcagtgcacagcagtcccttc
ctcagagcagagagactacagggatacctcgccgctcacaaacaaaagctgcagtcgttc
ctgcaagtgaacatcagccaggtacatgtggatgagtgtgccaacacagactgcggcggc
agcggcggctgctccaacgtgctgagcgtcagcgacacgcccactgtggtggattctggg
agcctgtcactggtgtcggtgacggtggaatccacggcagtatgcagctgctccggtaga
gaacacgtccacaagatttgttcctcctatcccagaaacccctgcttcaacgggggcatc
tgtgtcgacactcagagcgggtacagatgccagtgccctgcgcagttcgaggggccagag
tgccagcagaccaaacacagtttccatggcaacggctatgcctggtttcctcccataagg
ccttgcttcgagagccgtctctccctggagttcatcacggaggttgcagatggtctgctg
ctctacagcgggcccctggcccagctacagccctgggaccttgaggacttcatggccata
gagctgatcgatggcactcccacactcaagataaaccatggctcgggcacactggtcttg
cagttgccaggcaacgtgaacgtggcggacagacggtggcaccgtctggatgtgaggagc
aacagtaaggaggtacgcttcacactggaccgctgtgccggggccaccgtcatggaaatg
gagggagtgggcagctggttgaccacagaggaccactcatcctgcgaggtcactggggtc
acgcccaacctggacaggcacctgaacgggacccaggtgttacagctgggtggagtcaat
gaggacctgccctatgtctacccgcagttacaacacaaacactttactggctgcatccgg
aacctcgttgtcgacagcaagttctatgacttgggcactccagctgactctgtgggcagc
tccccaggctgtctgactacggatgggagctgtgtcaacgtgggcatcccctcctgtggc
cctcggggtcgctgccatggagagtggggctccttcagctgccagtgcataccggggtac
actgggaatcagtgtgagcacgaagttccagagtattcctttgatgggcggagtcatgtt
cattatcagttggcatctcctctgccagcccggcggacccaggtacaggttctggtccgg
acccgcaaacatggtagtgccatcctcagcctactgtccaaggaacagactgaatacctg
cgcttagagatctaccagggcctactggctgtcttctataacctaggagatggagactac
aacctgacactgccctcctatcgccttgacaatggcgagtggcacgaggtctacctagat
cgccacgacaacgagttgaccctgcgtctggacgggggcgggggcagacgggagaccagt
gcagctccaagccggagccgagagatcatcaccgaccctgcagtggtgatgctgggaaac
gccttcccctcaggctccaacaagagcttccagggttgcattcgggacctgaggctgaac
ggtcgatacgtgcctctggatggcctgtccagagatggggtctccgtggtcagttcccag
gggctctccttgggctgctcctccgactcctgcaagaggaaccaatgtagcccccccttc
acctgcgttgacctctggagagtccatgagtgcaggtgcccccctggccacatggtgaag
ctgaatggcacggggaaggtctgcatctacaccctgtgtgccagtcggccgtgccaccgg
ggcacctgcctggcacagtcaccctccaagttcacgtgccactgccccgagggttaccgg
gggcgccactgcgaggtggcgctggccatctaccgagacgacgtgggactgagcttcagc
tccctgttcgccatttgcatctgcttcatggctctgctagtgctgctgctgggcatcttc
ctgtacacccgctggcgcagctacaagggcctaaaggagggcgtttaccacgtgtcagct
caccatgatggctgggaggacattagagagaacgtgctcaactacgatgaggaaggagga
ggagaggaggaccagaatgcatatgatatggccgagctacagaagtctctccagcccagt
ccggcccagtctgtccagtacagccgaaccagggccatccaccaacatcaccacccccac
acccagcaccaacagccccaggacactcttagcaggttgggcgccagcaccgccccttcc
tccttcaccaccaccctgcggagggatgtgccccccatcaggtccctcgcccagggccag
agcaggcccctcctgctggccagaaagagcctgtccttctccagccaggacctggcccgc
tacctgtgtgagatcatccgggacgctgaccaggccccagagtcggcccccttcgactcc
ctgcaggtgttctccacggaggggggaggctcgctggccgggtccctcagctccttcagc
tcagccgggctggaggaggacacggctaggggccaagactccctgaaagattggggccca
cgtttcgagaaactcaaagccctctacgagaagaccgaggccagcgacctctga
DBGET
integrated database retrieval system