Oncorhynchus keta (chum salmon): 118362274
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Entry
118362274 CDS
T09424
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118362274
Spliceosome [BR:
oke03041
]
Complex C
Other components
hnRNP proteins
118362274
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
DUF1866
Motif
Other DBs
NCBI-GeneID:
118362274
NCBI-ProteinID:
XP_035598375
EnsemblRapid:
ENSOKEG00005020577
LinkDB
All DBs
Position
29:complement(9368541..9389731)
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AA seq
632 aa
AA seq
DB search
MAAEVNGSSAPVKEEDEPMDITVTHTENYQTLIDAGLPQKVAESLDKIFQTGLVAYADLD
ERAIDALREFNEEGALSVLQQFRESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKG
PDETKIKALLERTGYTLDVTTGQRKYGGPPPDEVYSGAQPGIGTEVFVGKIPRDLYEDEL
VPLFEKAGPIWDLRLMMDPLLSGQNRGYAFITFCNKDAALEAVKLCDNYEIRSGKYLGVC
ISVANNRLFVGSIPKNKTRESILEDFSKVTEGLVEVILYHQPDDKKKNRGFCFLEYEDHK
TAAQARRRLMSGKVKVWGNPVTVEWADPVDEPDPEIMAKVKVLFVRNLATPVTEELLEKT
FSQFGKLERVKKLKDYAFVHFEDRDAAVKAMQQMNGKELEGEEIEIVLAKPPDRKRKERQ
AQRQPTRTTGYDDYYYYPAPRMPPPMRGRGRGGRGGYAYPPDYYGYEDYYDDYYGGGYDY
HDYRGGYDDPYYGGYDDVYVPRGRGGRVSRGAPPPPRGRGAPPPRGRGGYVQRGAPMGVP
RGSRGSRGGPPQQRGRGIRGARGNRGDNLGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQ
QPLQQGGDYSGNYGYNNDNQEFYQDSYGHQWK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaagtgaatggcagttctgctccagttaaggaggaagacgaaccaatggac
ataacagtaacacacacagagaactaccagacactcatagatgcaggccttccacagaaa
gtggcggagagcctggataagatatttcagactggactggtggcttacgctgacctggac
gagagagccatcgacgccctgagggagttcaatgaggagggagccctgtcagtgttacag
cagttcagggagagtgacctgtcacatgtgcagaacaaaagtgcatttctctgtggtgtg
atgaagacataccgacagcgagaaaagcaaggaagtaaagttcaagaatccacaaagggt
cctgatgagactaagataaaggctcttctggaaagaacaggttacactttggatgtcacc
acaggacagaggaagtatggggggcctccacctgacgaggtgtactcaggggcccagcct
ggaatcggaacagaggtatttgttggcaagatccccagagacttgtatgaggatgagctg
gtgcctctgtttgagaaagccgggcccatttgggacctgcgtctaatgatggaccccctt
ctttcgggtcagaacagaggatatgccttcatcaccttctgcaataaagatgctgcccta
gaggccgtcaagctttgtgataattatgaaatccggtcgggcaaatacctgggtgtctgc
atctctgtcgcaaacaatcggctgtttgttgggtcaattccaaagaacaagacaagagaa
agcatattggaagatttcagcaaagtcacagagggcctcgtggaggtgatactctaccac
cagccagatgataaaaagaagaaccgtggcttctgcttcttagaatacgaggaccacaaa
actgcggcccaggcccgtcgccgcctcatgagtggcaaggtgaaggtgtgggggaaccct
gttactgtggagtgggcagatccagtagacgaaccggacccagagattatggcaaaggta
aaggtgctgtttgtgaggaacctggccacaccggtcacagaggagctcctagagaaaacc
ttctcccagtttgggaagttggagcgggtcaagaagctgaaagactatgcctttgttcac
tttgaggacagagatgctgccgtgaaggcaatgcaacaaatgaatggcaaagaattggaa
ggcgaggagatagagattgttctggcaaagcctccggacaggaagaggaaagagcggcag
gcccagagacagccaactaggaccacaggatatgatgattactactattatcctgctcca
cgcatgccgcctcccatgcgaggcaggggccgaggtgggagaggtggctatgcctaccct
ccagactactacggttacgaggactactacgatgattactacgggggtggttacgactac
catgactaccgaggtggctacgacgacccttactacgggggatacgatgatgtctacgtg
ccgagaggaagggggggcagggtgagtcgaggtgccccccctccccctagaggccgagga
gcaccaccccctcgtggcagaggtggctacgtccaaaggggggctcctatgggtgtaccg
aggggaagccgtgggagccggggaggtccgccccagcagaggggccgcggcatcagaggg
gccaggggaaaccgcggggacaacttgggcgggaagaggaaggctgacggttacaaccaa
ccggactccaagcgccggcagaccaacaaccagaactggggctcccaacccattgcccag
caacccctgcaacaaggtggcgactactctggtaactatggttacaataatgacaaccag
gagttttaccaagattcttatgggcaccaatggaagtag
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