Oncorhynchus keta (chum salmon): 118362343
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Entry
118362343 CDS
T09424
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118362343
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118362343
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
118362343
NCBI-ProteinID:
XP_052337065
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Position
2:67295129..67383804
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AA seq
1322 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKAYIMGEGEDGDKDTRRKSIRMKPLPSPTSKGSIKGIGE
TRSGDTVIMETDIGRPTKTSLNGDCRRFRGSFSSITSRHVHDSDSAEQRRLITEGDVTPS
EESPPGAIGGGADQGAQGASAGGAGGAQHASLDQESGFIKLDGIDQISPDDERLYQAGFI
HRQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMV
GNLIVIPVGITFFKDEHTPPWIIFNVISDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIK
IKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRL
IRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSKN
KMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHAT
ALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELN
EPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYF
IQHGVVSVLTKGNKETKLLDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLE
EYPMMRRAFETVALDRLDRIGKKNSLLQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMAT
CAHLLQNIPPPQPPSPGHTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPHLPAALFRP
PVTVLGSRNLQDPPPGRLNKFHTSAPTSSMGPDSPSSTPSKLHCSGMDTALLASFRAHHT
TQGSGAASSSQQASSSSGTQPGPTGAFPFGPFSSSGGSPSHSTAQSTAQLHSQPQTQQPF
RCTTPPLAALFQQGVMEGAVGTGMGGATGGATGWSSGGTTGGEIGGVAEGATGGTIRRAT
GWGRRGSIEGYTTGVHIGGATGGYSEGASGGHIRGTSGGHIGATGGAMGGATGGMTIGVL
GTSSSGCSISPQSTGSSGNINPCQLLHSQLPPKPPQVGSLQQFAGGGRTPSGFYHLPPPG
SPSSSSTQQAPEGSPSPLAQFSLAGLQSGLVPQLSLERSALASLAQYGSANVSPCYTPLG
PSPTVQSPVTGRTFHYSDSSSATGSHSSLLMPQTSLPSQQHASGSESLLGLGSFSEDMKL
LSCSNISLPQDVTQAMGYSSLPRSSPPRTSPPRSSPPRTSHPCSSMEPGYCFSSPYTSPI
LVPKPCSSVPGHMTPPVPAQMSPGHLQHQTQSPVASPALPPRKGSAAHSELEPVRSKLTS
NL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcactcctccatgcgtaaaaggctctacagtttgccacagcatattgga
cagaaagcttatattatgggcgaaggagaagacggcgacaaggacacccggaggaagagt
attaggatgaaacccttgccgtcaccaacctccaaaggaagcatcaaaggcatcggggag
accagaagtggagacacggtgatcatggagacagacattgggagaccaacgaagaccagt
ttaaatggagattgtcggagatttcgtggcagtttctcctccatcaccagtcggcatgtg
cacgactcagactcggcggagcagaggcgcctcatcacggaaggggacgtcaccccgagc
gaggagagccctcccggagctattggcggtggggcggaccaaggtgcgcaaggcgccagc
gctggtggtgctggtggtgcccaacatgcttctcttgaccaggaatcagggttcataaag
ttggatggcattgatcaaatttcgccggacgacgagagattgtaccaggcaggattcata
cacaggcagtttggggcaatgctgcaaccgggggtcaacaagttctccctaaggatgttt
gggagcgaaaaggcggtggaacgggaacaagagcgggttaaatccgccggattttggata
attcacccgtacagtgatttcaggttctactgggacctgaccatgctgctgctgatggtg
gggaacctgatcgtcatcccagtgggcatcaccttcttcaaagacgaacacacgcccccc
tggatcatcttcaacgtgatctcagacaccttcttcctcatggacctggtgctcaacttc
cgcacgggcatcgtcaaggaggacaacaccgagatcatcctggacccacaacagatcaag
atcaagtacctgaggagctggttcgtggtggacttcatctcctccatacctgtggactac
atcttcctcatcgtggagacgcgcatcgactcagacttctacaagacggcccgggcgctg
aggatcgtccgcttcaccaagatcctcagcctgctcagactgctcaggctgtccaggctc
atccgatacatccaccagtgggaggagatcttccatatgacctatgacctggccagtgcc
atggtgcgtatcgtcaacctgattggtatgatgctgctgctgtgccactgggacggatgt
ctgcagttcctggttcccatgctgcaggacttcccccaggactgctgggtgtccaaaaac
aaaatggtgaacgacacatggggacagcagtactcctacgccctgttcaaagccatgagc
cacatgctgtgtatcgggtacggcatgtacccacctgtgggcatgacggacgtgtggctc
accatcctcagcatgatcgtgggcgccacctgctatgccatgttcgtgggtcacgccacc
gcactcatccagtctctggactcctcccgtcggcagtaccaggagaagtacaaacaggtg
gagcagtacatgtccttccacaagctgccggctgatatgaggcagaggatccatgactac
tacgagcatcgctaccaaggcaagatgtttgacgaggagagcatcctgggagaactcaac
gagccactcagagaggaaatcattaactttaactgtcgaaagctggtggcttccatgcca
ctgtttgccaacgcggaccccaactttgtgacctccatgctgaccaagctgcgcttcgag
gtgttccagcccggagactacatcatcagagagggcaccatcggcaagaagatgtacttc
atccagcacggagtggtcagcgttctcaccaagggcaacaaggaaaccaagctcttagac
ggatcctacttcggggagatctgtctgttgacgcggggtagaagaacagccagcgtcaga
gcagacacctactgccgtctgtactctctgtctgtggacaacttcaacgaggtcctggaa
gagtaccccatgatgagacgggccttcgagaccgtggctctggaccggctggaccgcata
gggaagaagaactccctcctgcagcacaaggtgcagcacgacctgagctccggcgttctc
aactaccaggagaacgagatcatccagcagattgtgcagcatgacagagacatggccacc
tgcgcccacctcctgcagaacattcctccgcctcagcccccgtctccggggcacaccccc
gtcatctgggctcccctcatccaggcacccctgcaggctgctgccgccaccacctctgtt
gccatcgccttgacgcaccacccccaccttccccacctccccgccgcgctcttccgcccg
ccggtcacggtcctgggctccaggaacctccaggaccctccccccggccggctgaacaag
ttccacacgtcagcgcccacctcctccatgggacctgactccccctccagcaccccatct
aaactgcactgctctgggatggatacagccctgctggcctccttccgggcccaccacacg
actcaggggtcaggggcagccagctccagtcagcaggcgtccagcagcagtggaacccag
cctgggcctaccggagcctttccctttgggcctttctcctcctccgggggctctccctcc
cacagcacggcacagagcacggcccagctacactcacagccccagacgcagcagccattc
cgctgcaccaccccgcctctcgctgccctcttccagcagggagtcatggagggagcagtg
gggacagggatgggtggagcaacagggggagctacaggttggtcttcaggaggcactacc
ggaggtgaaataggaggggttgctgagggggccacgggtggaacaataagaagggccact
ggttggggtagacgtgggtctatagaaggatatactactggagtacatataggaggagcc
actggggggtactcagaaggggctagtggtgggcacattagaggaactagtggaggacat
ataggagctactggtggagcaatgggaggggctacaggtggaatgacaattggagttctg
ggtacctctagttctggttgtagtatcagcccccagtccactggttcatccggcaacatt
aacccctgtcagctgctccacagccagctgccccccaagcctcctcaggtgggctccctg
cagcagtttgcaggcgggggtaggactcctagtggcttctaccacctcccccctccaggc
tccccatcctcctcctccacccagcaggccccagagggctccccttctcccctggcccag
ttcagcctggcaggcctccagtctggcctggtccctcagctgtccctggagaggtctgcc
ctggcctcgttggcccagtacggctcagctaacgtctcgccctgctacacccccctgggg
cctagccccacggtccaaagcccagtcacaggaaggactttccactacagcgactcgtcc
agtgccacagggtcccacagctctctgctcatgccccagacctccctccccagccagcag
cacgcatccggcagtgagtctctgttggggctgggcagcttctctgaggatatgaaacta
ttgtcctgttctaacatctccctgccccaggatgtgacccaggccatgggatactcctcc
ctcccacgctcctcaccccctcgcacctcgcccccacgctcctcaccccctcgcacctca
cacccatgctcctccatggagccaggatactgcttctcctcgccctacacctcccccatc
ctagttccaaaaccctgtagctcggtgccagggcacatgactcctcctgtccctgcccag
atgtctccaggacacctgcagcaccagactcagtcccccgtggcctccccggccctgccg
ccacggaaaggctcggcagcccactctgaactagaacccgtccgctccaaactaacctcc
aatttgtga
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