Oncorhynchus keta (chum salmon): 118362431
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Entry
118362431 CDS
T09424
Name
(RefSeq) 5'-3' exonuclease PLD4-like isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00564
Glycerophospholipid metabolism
oke00565
Ether lipid metabolism
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
118362431
00565 Ether lipid metabolism
118362431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118362431
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
118362431
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
118362431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
118362431
NCBI-ProteinID:
XP_052342128
LinkDB
All DBs
Position
29:complement(20109272..20113846)
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AA seq
490 aa
AA seq
DB search
MPEMSSPYNHLHDSHVPNVRGSKRLVSVAVAVGCLTAFGALLSFSMYEKSTEEHFQNCKV
FQETNTDQNNISEEQSRIILVESIPLYMKYDDNATFGTPVDKAWRDLLSMATYQVDVASF
YWTLTGDDININSSTDLPGKNILEQFGALPSRNVSVRVVTSIPSVLTNSTDLHFLRQKGV
QVRKVPFGRLTGGVLHSKFWIVDRKHIFLGSANMDWRSLTQVKELGVVIYNCSSLAEDLH
KIFESYWVMGHRNSSIPNPWPSKYDTDINKEHPMLLKTDNVSSKIYITASPPTFCPASRT
QDLDSILSVISGAQHYIDVAVMEYFPTTRFIHPQRYWPAIDDALKRAAFERNVKVRLLVS
CGRDSDPAMLPFLQSLASLNYPGQHISIHVKLSIVPVGNQSEIPHSRVNHNKYMVTDKMA
YIGTSNWSADYFNTTAGVGLVVSQHAPHWAWRTQALQGQLRAVFDRDWQSQFTVCLADLG
HHPDCALSKG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccagagatgtcctctccttacaatcatttacatgatagccatgttcccaacgtaagg
ggatccaaacggcttgtttcagttgctgtggcagtgggatgtttgactgcattcggggca
ctgctctccttttctatgtatgagaagagcacagaagagcatttccaaaactgcaaggtc
ttccaagaaacaaacactgatcaaaataacatttctgaagagcaaagccgtataatcctc
gtagagagcattcccctgtatatgaaatatgacgacaatgcaacctttgggaccccagtg
gacaaagcctggagagatctcctgtccatggcaacctaccaagtcgatgtggcttccttc
tactggactcttaccggtgatgacatcaatatcaactcttccactgacttgcctggaaag
aacatactggagcagtttggagctttaccttccagaaatgtgtcagtgagagttgtgaca
agtattccctctgtgctgacaaactccacagatcttcattttctgagacagaaaggagtc
caagtaagaaaagttccctttgggcgtttgactgggggtgtactccacagcaagttctgg
attgttgataggaaacacattttcctgggaagtgccaacatggattggaggtctcttaca
caggtaaaggaactgggagtggtgatctataactgctccagtctggctgaggacctccat
aagatctttgagtcatactgggtgatgggtcatcgcaacagctccatcccaaacccttgg
ccctccaagtatgacactgacatcaacaaagagcaccccatgctgctgaagactgataat
gtttcaagcaaaatctacatcacagcctctcctcccactttctgccccgcctctcggacg
caggaccttgattctatcctctcagtgatctcaggggcacagcactacattgatgtggca
gtcatggagtatttccccaccacacgcttcatacaccctcaaaggtactggccagccatt
gatgatgcattaaagagggctgcttttgagcggaatgttaaggttcgtctgctggtgagc
tgtgggcgggattctgatccagccatgcttccttttcttcagtctctagcctccctgaat
taccctggccagcatatcagcattcacgtgaaactgtccattgtgccagtagggaaccag
tcagagataccccactctagagtaaaccataataaatacatggtgactgataaaatggca
tatattgggacatctaactggtcagctgactacttcaacaccacagctggagtggggctg
gtggtttcccagcacgcaccacactgggcctggaggacccaggctctgcaggggcagctc
agggcagtatttgacagggactggcagtctcagtttactgtatgtctcgctgacttgggt
catcaccctgactgtgccctctcaaaaggatag
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