Oncorhynchus keta (chum salmon): 118362594
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Entry
118362594 CDS
T09424
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118362594
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
118362594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RtcR
A2L_zn_ribbon
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
118362594
NCBI-ProteinID:
XP_052342286
LinkDB
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Position
29:complement(25662813..25712891)
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AA seq
622 aa
AA seq
DB search
MSSRVCNNCGGTDIDVDQARGDAVCMGCGSVLEYNVIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGFYKGVGRESRAQSLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
HLTTGRRGAHVVAACLYLVCRTERTPHMLLDLSENHIVNLYILGRTFLVLARVLCINAPA
IDPCLCIPCFAHMLEFGEKNHEVSMTALRQLQRMKRDWIHTGRRPSGLCGAALLVAARMH
KFRCTIKEIISVGKVCEATLRKRLNEFEDTPNSQLTIEEFIKVDLDQECDPPSFIDGQRN
KRMKLLEEELEKKIGYVQGEIHEYQDEIEMEQSRPKLRVMYGSYAKTGTAQMGPSALVSH
EREDEELKAVAQHLNKDLCDQVLPGEEEEGCGERHEERPPRRGPSLVSLLGPMPTAANLG
LPESISKSPEEEKENDGDTENGELDLSGIDEIELVKIKTDLWMKQNEDYLKGKEERIAKE
KELGIYKEKPKSSASKKKVLIHASTANEAIEKMLGQKKISTKINYDILKELNVKPSTSPA
RQIAQSPKGATPGDQRLTGQYRKPLNVPLSLGTPLSTLGKRLRPFISAQPHKKLALDQIA
NPLPAPPEAAPHCADREWACGL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagagtatgtaataactgtgggggcacggacatcgatgtggaccaggccaga
ggtgatgccgtgtgcatgggctgtggctctgtcctggagtacaacgtcattgtgtctgag
gtccagttcatggagacaggagggggaggctcctcggctgtgggacagttcgtagctgga
gacgcctctggaaggaacccaacttttggagaagggttctataaaggtgttggaagggag
tcccgggcccagtccctgcagaacgggagacgtcagatcaacacgctgggccaccagctg
cagctgaaccagcactgcctggacacagcctttaacttctacaagatggctgtgtgtaaa
cacctgacaacgggccgacggggggcccacgtggtggctgcatgcctctaccttgtctgc
aggacagagaggacacctcacatgctgcttgacctcagtgaaaatcacattgtaaatctt
tacatcctgggtagaacctttctggtgctggccagagtgctctgcatcaacgcccccgcc
atagacccctgcctgtgcatcccttgctttgctcacatgctggagtttggggagaaaaac
catgaggtgtccatgacagcactgcgacagctgcagaggatgaagagggactggattcac
actggacggaggccatcaggactgtgtggcgcagccctgttggtcgctgctcgcatgcac
aagttccgctgtaccatcaaagaaatcatcagtgtagggaaggtgtgtgaggccacacta
agaaagaggttgaatgagtttgaggacacgcccaacagtcagctgaccattgaggagttc
ataaaagtggatctcgaccaggaatgtgacccgccctctttcatcgatggccagaggaat
aaaagaatgaagctgcttgaggaagaattggagaagaagattggttatgttcaaggcgag
atccatgaataccaggatgagattgagatggagcagagccggcccaagttgagagtgatg
tatgggtcctatgcaaaaacaggtacggcacagatgggtccttctgcgctcgtcagccat
gagagggaggacgaggagctgaaagctgtggcccagcatctcaacaaggacctgtgtgac
caggttctccctggagaggaagaggaagggtgtggagagaggcacgaggaaagacctcca
cgcagaggcccatcgttggtctccctcctagggcccatgcccaccgcagccaacctgggc
ctcccagagtccatcagcaagtcccccgaagaggagaaggagaacgatggggacactgaa
aatggagagctcgacctaagtggtattgatgagattgagctggtgaaaatcaagactgat
ctttggatgaaacagaacgaagactacttgaaaggaaaggaagagaggatagcgaaagag
aaggagctggggatttacaaggagaagcccaagagttcggcctccaaaaagaaggttctg
atccatgccagcacggcaaacgaggctatagagaagatgctgggacagaagaaaatttcc
actaaaatcaactacgacatcctaaaggagctgaacgttaagcccagcaccagtccagcc
cgccagatagcacagtcaccaaaaggagccacccctggagaccagaggctgactggacaa
taccgcaaacccctcaatgtccctctgagcctgggcacaccactcagcaccttgggaaag
aggttacggcccttcatatcagcacaaccccataagaagctggctctggaccagatagcc
aaccccctgccggcgccccctgaggcggcgccccactgtgctgatagagagtgggcctgt
ggtctatga
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