KEGG   Oncorhynchus keta (chum salmon): 118362698
Entry
118362698         CDS       T09424                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118362698
   03015 mRNA surveillance pathway
    118362698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118362698
   03041 Spliceosome [BR:oke03041]
    118362698
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118362698
Spliceosome [BR:oke03041]
 Complex C
  Other components
   EJC/TREX
    118362698
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 118362698
NCBI-ProteinID: XP_035599145
LinkDB
Position
29:30027375..30032589
AA seq 694 aa
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQVRRPTIPGVGGGRGRGINL
LRRGLSDISGGPGGPPVKQRDIEGALLRLAGDQRGRRDSRHDSDAEDDDDVKKPVLQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQK
LEIQAEQERKKVEGERRELFEERRAKQTELRLLEQKVELAQLQEEWNVHNTKIVKYIRTK
TKPPIFFLPGRMCSATQKLLDESQKKMNVMFEERREAFAEHLNKMEARPRRQSQRDTALG
KDLKKEDREEGKPTGQVVKVTGNRFDVEMEEEDEATIEEEEGGEGVKHKEDRKKKPVEKV
GEQESKKGGTKADEMEEAEEDSQDTRIVEFRDVGEQMEGTALVREAEGQARDGDQKIEDS
PVEVGNEKGVEEQQPVKAEKEPLHGQDLTAVSDGQEKSIDMQPNEDEEPRTEVATPLLSE
CNPRVEVSDVTSMAPEVQIPLLETGTDPEPLTTEQSQEADQGAIKQTINAQPAQAQDDAA
APKELAPPSKEASRGRKKSKDKKGGGGGRSSSSSSSSSSGSSSSGSSGSSSSGSSSRSSS
SSGSSSSSSSRSRSRGRKDKKRRRRPSERDRERKKAVVERSHKSSKGSGRESKGSKDKGS
KSDRKRTTSEGSRSGKRSSRGDRDRKSDRKEKRR
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcggtggcagtgggatctttgcaagcccagcttgagaaagcgaaagagagtttgaaa
aatgtagacgataatattcgtaaattaactggtcgggatcctaatgaattgagacccggc
caagttagacggccaaccatcccaggtgttggaggaggtagggggcgaggaatcaacttg
ttgaggcgtggactctccgacatcagcggtggaccaggaggacccccagtgaaacagagg
gatattgaaggggccctcctgaggctggccggtgaccagagagggaggagagattcacgc
catgacagcgacgctgaagatgatgacgatgtcaaaaagccagtgttgcagtcatcagta
gtagctacctccaaggagcgtacacgtcgagacctgatccaggatcagaccatggatgag
aggggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacattacagaaattc
aagcaggaatctaatgtggcaacggataggcaaaagaaacgcattgagattgaacaaaaa
ttggaaattcaagctgaacaagagcgcaaaaaagtagagggcgaaagacgagagctcttt
gaggagaggcgtgccaagcagacagagctgagactgttggaacagaaagtggagcttgct
cagttgcaagaggagtggaatgtgcacaacacaaaaattgtcaagtacatccgcacaaag
accaagccacccatcttctttctgcctgggaggatgtgctcagccactcagaagctctta
gatgagtctcagaaaaaaatgaatgttatgtttgaggagagacgcgaggcatttgctgaa
catctgaataagatggaggctcggcctcggcgccagtctcagagggacaccgctctgggt
aaggacctgaagaaagaagatcgagaggagggtaagcccacgggtcaggtagtcaaagtg
acaggtaacaggtttgatgtggagatggaggaggaagatgaggcaacaatagaggaggaa
gaggggggtgagggtgtaaaacataaggaggacagaaagaaaaagccagtagagaaagtc
ggggagcaggagtctaagaagggggggactaaagcagatgagatggaggaggctgaggaa
gacagtcaagacactagaatagtggagtttagagatgtgggggagcagatggagggtact
gcactagtgagggaggctgaagggcaggccagggatggggatcagaagattgaggatagt
ccagtggaggtaggtaatgagaaaggagtcgaagagcagcaaccggttaaggcagaaaag
gagccccttcacggtcaggacctcacagctgtgtcagacggccaggagaagagcattgat
atgcaaccaaacgaagatgaagagccacgtacagaagtggccacacccctgctctcagag
tgcaaccctcgtgtggaagtctctgatgtaacatctatggctcctgaggttcagatcccc
ctactggagactggaacggatccagagccgctcacaaccgagcagagccaagaggctgat
caaggtgccataaagcagaccattaatgcccagcctgcccaggcccaggatgatgctgcg
gctcccaaggagctggcgcccccgagcaaggaagccagcaggggacgtaagaagtcaaag
gacaaaaagggaggtggtggtggtagaagcagcagtagctcatctagcagctcctccggc
tcctcgtccagtgggagctctggctcctcctctagtggctcctccagcaggagcagctcc
tccagtggcagctcctccagctcttctagcaggagccgcagccgagggaggaaggacaag
aaacgtaggaggaggccatccgagagggacagggagagaaagaaggcagtagttgagagg
agccacaagtcatccaagggcagtggtcgtgaatccaaaggttccaaagataagggctcc
aagtctgacaggaagaggaccacctctgaaggcagccggtcagggaagaggtcctctcgc
ggcgacagggatcgcaagtcagataggaaggaaaagaggcgttaa

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