Oncorhynchus keta (chum salmon): 118362751
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Entry
118362751 CDS
T09424
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118362751 (irf2bpl)
04121 Ubiquitin system [BR:
oke04121
]
118362751 (irf2bpl)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118362751 (irf2bpl)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Atypical E3
118362751 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118362751
NCBI-ProteinID:
XP_035599229
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All DBs
Position
29:33088197..33091212
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AA seq
669 aa
AA seq
DB search
MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQGGRSPGPPPPPTVKTQSAISAKETVQISHVDGPSKQQQSGMDRYSLSAERPRFDYS
SIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLAAVPGQMNVPPNLLPQTM
LNGPSSATAIASHSLSSRPPPPSIVGPSLSMAAQSMSEQGKRPGSVSSTDQERDLKEKQR
NAEALAELSESLRNRNEDWGNKPKIVRDTLVTLSNSSPFDVRFKKDHSLVGRVFAFDAVS
KPGMDYELKIFVEYPSGSGNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSG
DWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRALPSTSAPRTGVRK
RKASPEPDSVESALKLSEQEQQRQQWMASQSEALKLTMASGSFGASHGGPPPLGPGHSVH
SSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNNSSPVSPASVS
GQRRLASRNGDLNLAGTPSQSNAHSGMDQVHAQNIPDSPMANNGPLCCTICHERLEDTHF
VQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGD
VKVKKERDP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtatcgtcatctcggagacagtcatgttacctgtgcgatttaccc
cgtatgccgtgggctatgatatgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgaaggtgcggatcggatcgagtttgttatcgaaactgcacgccacctcaaacgagct
catggtttccaaggggggagatcccccggtccaccaccgccgcccacagtaaaaacacag
tcggcaatatcagccaaggagacggtgcaaatcagccatgtggatggaccctctaaacaa
caacagtcggggatggaccgctactctctgagtgcggaaagacctcgctttgactactcc
agtattggcgcccatgccagcagacttcccaatggaatgagcggtccaaatgggttcccc
aaaccggacgatggtcccccagaactgaaccgacagagcccgaactcccgtcggagccac
ggtctcgctgcggtcccaggacaaatgaacgttccccccaaccttctcccacagaccatg
ttgaatggaccctcctcggcaacagccatagcctcacatagcctgtccagccgcccccct
cccccatccatcgtgggaccctctttgtccatggccgctcagtccatgtcagaacaaggt
aaacgaccaggttctgtgtcgagcactgaccaagagagagatctgaaagagaaacagcgt
aacgcagaggctttggctgagctcagtgaaagtttaaggaacagaaacgaagactgggga
aacaaacctaaaatagtaagggacactttggttactctttcgaacagctccccgtttgat
gtgagatttaaaaaggatcattcactcgtgggtagggtgtttgctttcgatgcagtgtca
aagcctggaatggactatgaattgaaaatatttgtcgagtacccaagtggatctggtaat
atattttccagcgcatcaggggtggccaaacaaatgtatcaggactgcatgaaagacttt
ggcagagggctttcctcgggctttaaatatttggagtatgagaaaaagcatggttcgggg
gactggcgactcctgggtgatttgttgcccgaatcggtccgattcttcaaagaggggctg
ggggttgaaatgttgcctcagccctacatcgatgccagctgcccattgctgcccactgct
ttggtcaacatccctcgtgccttgccatctacgagtgcaccgaggactggcgtacgaaag
cgtaaagcctccccagaacctgactctgtagagagcgccctgaaactatctgaacaagaa
cagcagaggcagcagtggatggccagccagagcgaggcgttaaaactgaccatggcatcc
ggatcattcggtgcctcacacgggggacctccgccgcttggccctggccattctgttcat
tcaagtcgcgccacaccccctgaatctgcgccccagaatggacagtctccaatggccgcg
ctcatgtctgtcgcggacacgttgggcaatgcgcactctccgaaggacaacaactctgtt
cactctacaacatccaccaggcataacaacagcagcccagtctccccagcctctgtttct
gggcagaggcgtttggcttcccgtaacggagatctcaatctggccgggactccctctcag
tcaaatgcgcattctggcatggatcaggtccacgcgcaaaacattccagattctcccatg
gcaaacaacggacctctgtgttgtaccatttgccacgaacgtttagaggatacccatttc
gttcagtgtccgtcagttcccaaccataaattctgtttcccttgttctcgagagagcatc
aaagcgcagggagcaactggcgaggtgtattgtcctagcggagagaaatgccccctggta
ggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagctggggac
gttaaggtaaaaaaggagagagacccatag
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