Oncorhynchus keta (chum salmon): 118362872
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Entry
118362872 CDS
T09424
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a isoform X1
KO
K18753
butyrate response factor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118362872 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118362872 (zfp36l1a)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118362872 (zfp36l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
118362872
NCBI-ProteinID:
XP_035599461
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Position
29:complement(39098463..39103800)
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AA seq
380 aa
AA seq
DB search
MTMAVVSPFDFSEVMNKNNKMLNYNNNNILSSPHHAMSTPTGALLDRDRKAVGTPSLGRG
VSVYHSVTLPNPSSKFHQNQFLNSLKISDPSSCSGLISGSNKENRMRDRSFSETGERLLQ
KCLGPASPTSLGCNSQSQQQSQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSL
SRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPPGSSSFSPLSSNKLERPRLQH
SYSFAGFPSSGGLRGEGSLTPTPMFSPEEMPEWPSCNPFTYSSQELANLFGPSLGSGGPA
GTEPNTPAPLSPTNTPCFFRPMSESPTQMFESPSSPPQDSLSDQEGYQSSSGGSLSGSES
PSLDTNRRLPIFSRLSVSDD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgactatggcagtggtttcgccattcgacttcagcgaagtaatgaacaagaacaacaag
atgctgaactacaacaacaacaacatactgagctccccccatcatgccatgtccaccccc
accggagccctgctggacagggacaggaaggctgtggggaccccctcgctgggcagaggg
gtgtctgtgtaccactcggtcacccttcccaaccccagctccaagttccaccagaaccag
ttcctcaacagcctgaagatatcagacccctcctcctgctcagggttaatcagtggcagc
aacaaggagaaccgcatgagagaccgctccttctccgagacaggcgagaggctcctacag
aagtgcctggggccggctagtcctaccagcctgggatgcaacagccagagccagcagcag
agtcaggtcaactccagccgctacaagacggagctgtgccgtccgttcgaggagaacgga
gcctgcaagtatggcgacaagtgtcagttcgcccacggtatccacgagctgcgttctctc
agccgccaccctaaatacaaaaccgagctgtgtcgcaccttccacaccatcggattctgt
ccctacggtccccgctgtcacttcatccacaatgcagaggagcgccgtggaccccctccc
ggatcctcctccttctccccgctctcctccaataagctggagcgtcctcgtctgcagcac
agttacagcttcgcagggttccccagctccgggggtctgagaggagagggcagcctcacc
cctacacccatgttctccccagaagagatgcctgagtggccaagctgcaaccccttcaca
tattccagccaggagctggccaacctgtttggccccagcctgggatccggcggccccgcg
gggaccgaacccaacacccctgcacccctgtctccgaccaacaccccctgcttctttagg
cccatgtcggagtcccccactcagatgtttgagtctccgtccagccctccacaggactcc
ctgtcagaccaggaggggtatcagagtagctcagggggcagtctcagcgggtcagagtcc
cccagcctggacaccaacagacgcctccccatctttagccgcctctctgtctctgacgac
tag
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