Oncorhynchus keta (chum salmon): 118362878
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Entry
118362878 CDS
T09424
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118362878
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118362878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118362878
NCBI-ProteinID:
XP_035599477
LinkDB
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Position
19:complement(25745309..25749260)
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AA seq
457 aa
AA seq
DB search
MSFSQLGYSQFLSGSQEVYGGDLAGLGRDGAADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDASDSGSLVSQRTMSVKALRSMEGPISLIKAPVGDCKNAVDLSSNAPVCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIAHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPSGHHMPLHGALNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctaagtggctcccaggaggtttacggg
ggcgacctggccggcttaggccgggatggagccgcggatggcggcgtaaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccatacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggaacaccagaagaacccgtac
cccaccaagggagaaaagatcatgctggccatcatcacaaagatgacactcacacaggtg
tccacatggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacacgggagcgaggatgaagaggaggaggagatcgatttagaaagtatcgacatcgat
aaagtcgaggagaacccaggagatcagagggaagtggagggagaggggaagctggccgcc
agggacgcatcggattctggtagcttggtgagccagaggacgatgtctgtcaaggccctc
agaagtatggaggggcctatttctctcattaaggctcctgttggtgattgtaaaaacgct
gtggatctttcctccaatgcaccggtgtgtcagaggcccccacagaacaaacccaaaatc
tggtctctggcggagacggccacaagccccgatagttccatcaaaccttccccggctgtc
tcgattgctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaacgcggcgttcctcagc
gccaactctctgctgggtgtcaggtcgcttctcggcgcggcaaacccatccggacaccac
atgcctctccatggcgcgctgaaccatcaggacgcacggttgacgcaggcctcaggagca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccacggaacggcgcagcgggccctctcgacaatttccacaatatga
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