Oncorhynchus keta (chum salmon): 118362882
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Entry
118362882 CDS
T09424
Name
(RefSeq) synaptosomal-associated protein 23-like isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118362882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118362882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118362882
Membrane trafficking [BR:
oke04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
118362882
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118362882
Exosomal proteins of other body fluids (saliva and urine)
118362882
Exosomal proteins of colorectal cancer cells
118362882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
COG6_N
Exonuc_VII_L
Sec20
Use1
RmuC
Motif
Other DBs
NCBI-GeneID:
118362882
NCBI-ProteinID:
XP_035599480
LinkDB
All DBs
Position
29:40059370..40100147
Genome browser
AA seq
244 aa
AA seq
DB search
MEWNGGKMNRPQSVELGVTGGTSNFDSSKMADMSVEEITMRANQVTDESLESTRRMLQMA
EESRQTGVNTIEMLDQQGEQLKRTEEGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVT
SIEHDSKYKRTWGIGDGGSAGGGEGVDSSVVSTQPAGIRNGQANQQQSMGGPYVKRITND
AREDEMEENLDQVGSIIGNLKNMAMDMGSEIDKQNKHIDRITDKADMNKARIDEANQRAN
KLIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaacggtggaaagatgaataggcctcagagtgtagagcttggtgtgacagga
ggaacctccaactttgacagcagcaaaatggcagacatgtcagtggaagagatcaccatg
agggccaaccaagtgaccgatgagtccttggagagcaccaggcggatgctacagatggct
gaggagagcaggcagactggtgtcaataccattgaaatgctggaccaacagggggagcaa
ctgaagcgtacggaggagggtatggaccagatcaaccaggatatgagacaggctgagaag
aacctgactgacctgtccaagtgctgtggcctctgtgtctgcccctgtgacagggtaacg
tccatagagcatgactctaagtacaagcgtacctggggaattggtgatggtggcagtgca
ggtggaggagagggagtggacagctctgtggtgtccactcaaccggcagggatccgtaat
ggacaggccaaccagcagcagtccatggggggaccttacgtcaagaggataaccaacgat
gctcgggaggatgagatggaggagaatctggaccaggtgggcagcatcataggcaacctg
aagaacatggccatggacatgggctctgagatagacaagcagaacaaacatatcgaccgc
atcacagataaggcggacatgaacaaagcgcgtatcgacgaagccaaccagcgagctaac
aagctcatcaagtag
DBGET
integrated database retrieval system
