Oncorhynchus keta (chum salmon): 118363160
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Entry
118363160 CDS
T09424
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118363160
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118363160
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118363160
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118363160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
XMAP215_CLASP_TOG
Sec7-like_HUS
TOR1L1_N
PDS5
Cnd1
Adaptin_N
HEAT_DAAF5
Dopey_N
MMS19_C
ParcG
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
118363160
NCBI-ProteinID:
XP_052344509
LinkDB
All DBs
Position
30:complement(54510163..54555752)
Genome browser
AA seq
1562 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLQKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAASSRGPSTPGSLQRSRSDV
DVNAAATACAKTRMTPVPSSPAPFSAASALPPGSYASLGRVRTRRTSSGSGVGASPSVTD
SRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGATTPVDRRPKVPRSHGCSRDTS
PDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRSTSALHSAESVG
HSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPVRRRYESPGIY
SDDDANSDASSACSERSYGSRNGGAPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNL
LVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILRYIE
CLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSWAGEELSGRPSTTVASL
PGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTGV
ASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSRGGALSPSMLEYDTENLNTDQIYSSLRGV
TEAIQNFSFRSQEDLMEPSRGKREDTPGVGTASHSGADVVEGPGGRTALDNKTSLLNTPS
PRSFSGPRGRDYNPYNYTDTISAYDKAALKETVYEDDVEQLRDGRQECGGENKMLHTKNS
SPAEQLELAGELLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETL
SDQDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLA
GSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDN
TESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDIS
SY
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggaacaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagagatcaggaccaagctcttctacaaaagatcatggat
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtcatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgcctttgaggaagtgcccgctatgcaacttttctccaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggggcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatctggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccggcagctgccagtccaaatctgtggccgtgagg
aggcgcagttttgagttcttggacctcttgctacaggagtggcagaccagctctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggcttcctccagaggtccctccaccccgggctctctacagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgcttgtgccaagaccaggatgactcccgtgccctcctcg
ccggcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcttggccgt
gtgcgtaccaggagaacgagttcggggagcggcgtgggggcgagtccctctgtcacagac
agtagggggagaagtcgagccaaaatggtgtcagtgtctcaacctggcagtcggtctggc
tcccctggtcgtctcctgagccacacatacggcaggatccccagggcaactggagcgaca
acgccagtagacaggaggcctaaagtcccccgcagtcatggctgcagccgagacaccagt
ccagacagatcaggcctggcgaggagtcgtatcccccggcccagcatgagtcagggctgc
agcagggacacctctagggagagcagccgggacaccagccccgctcggggattctctcct
ctggcgtccagacgtgtctcccgctccaccagtgctctccactcggctgagtctgtgggc
cactcagagcgtctaggtctggcccaccaggcccgtatctcagcctctgtcaacgccatg
aggatcctcaacaccgggaccgaggtggaggcagctgtagccgacgccctgttactagga
gacgccaggaacaacaagcggcggccagtcaggcggcggtacgagtccccgggcatctac
tcagacgacgacgctaacagcgacgccagcagcgcctgctctgagcgctcgtatggctcg
cggaacggtggcgcgccccactacatgagacagacggaggacgtggccgaggtgctgaac
cactgtgccagttccaactggtctgagaggaaggaggggctgctgggactacagaacctg
ctcgttagccagagaattctcagtcgtgtggagctgaagcggttgtgtgagatcttcact
aggatgtttgctgacccacacagcaaggtgttcagcatgtttctggagaccctggtagac
ttcatcaccctgcacagagaggacctgcaggactggctgtttgtcctgctcacccagctg
ctgaagaagatgggagctgacctcctgggttccgtacaggccaaggtccagaaggctctg
gacgtcaccagggactcgttcccgttcgaccagcagtttaacatcctgatgcgtttcatc
gtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgaggtacattgag
tgcttggcccgtcaaatggaccccgcagactttgtcaactccagcgagacacgcctggcc
gtctcccgcatcatcacctggaccacggaaccaaagagctccgacgtccggaagagcttc
caccatagctgggcaggtgaggagttgtcaggcaggcccagcaccaccgtagcctctcta
cctggagaggggaacgtggaggagaggtgcaagcaggcggcccaggtggttctgatcgcc
ttgtttgagctgaacaccccagagttcaccatgctgctgggggccctgcccaagaccttc
caggacggagccactaaactgctgcatagccacctgcggaactccagcaacaccggagtg
gcttctcccagtagcaccatgggacggactcctcccccgcctcgccaccccagcagtcgc
agcagccccctcacctctcccaccaactgctcccgtgggggcgcgctctctcccagcatg
ttggagtacgacacagagaacctgaacaccgatcagatttatagctccctgcgaggcgtc
actgaggccatccagaacttcagcttccgcagtcaggaggacctcatggagccgagcaga
ggcaagagagaggacacgccgggtgttggaacagcatcacactctggtgccgacgtagtg
gaggggcccgggggtcgcacggccctggacaacaagacctccctactcaacaccccctcc
ccgcgttccttctccgggccccggggccgcgactacaacccctacaactacacagacacc
atcagcgcctacgacaaggctgccctgaaagagacggtgtacgaggacgacgtggagcag
cttcgagatggccgccaagagtgtggtggagaaaacaagatgctgcacaccaagaacagt
tcccctgcggagcagctggaactggcgggtgagctgctgaaggagctgtctaaccccagt
gagaggccagaggagaggagaggagccctggtggagctgctgaagatagcccgggaggac
agcctggcagtgtgggaggaacacttcaaaaccatgctgctcctgctgctggagaccctg
tcagaccaagatcacaccatccgggccctggcactacgagtgctgaaggaaatcttacgt
aaccagccggcccgcttcaagaactatgcagagctcaccatcatgaagaccctggaggca
cacaaagactcccacaaagaggttgtgcgggcagcagaggagtcagcctccaccctggct
ggctccatccacccagaacagtgtatcaaggtgctgtgtcccatcgttcagacggctgac
taccccatcaacctggcttccatcaagatgcagaccaaggtgatcgaacgcatcaccaag
gagtccctccaccagctgctgcctgacatcataccaggactactgcaggggtatgacaac
acagagagcagtgtgaggaaggccagtgtgttctgtctggttgctgtctactctgtcatc
ggtgaagagctgaagccctacctggcccagctaacaggaagcaagatgaagctgctgaac
ttgtacataaagagagcccagacgtccaccagcaacagcagcagctcttcagacatctcc
tcatactaa
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