Oncorhynchus keta (chum salmon): 118363168
Help
Entry
118363168 CDS
T09424
Name
(RefSeq) lymphocyte antigen 75-like
KO
K06559
lymphocyte antigen 75
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
118363168
04090 CD molecules [BR:
oke04090
]
118363168
04091 Lectins [BR:
oke04091
]
118363168
Pattern recognition receptors [BR:
oke04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
118363168
CD molecules [BR:
oke04090
]
Proteins
118363168
Lectins [BR:
oke04091
]
C-Type lectins
Others
118363168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
118363168
NCBI-ProteinID:
XP_052344561
LinkDB
All DBs
Position
30:54939194..54979366
Genome browser
AA seq
1768 aa
AA seq
DB search
MTLQATFYLCFFLFFCDKTICFGTCASTTYSGNDTFTIQHVSTGKCLVATSTSGTGVSGI
AGAKSGGSGFNVTLGECDGSRGSQWKWGSGHRLFHVGTSQCLGLEEKTKALSLFSCSPME
NTMLLWRCLDWAIYTVDQMGLTVTDGLVSAKRDSSDAWRRDESTDNICQRPMRIVHTTNG
TSTGEPCEFPFHYNGSWYHECLPDDQSPGLYWCSTTSDFDADKKMGYCLKHEEGCKALFD
GPEEGPCYEFVSQVAVTWQEALDSCRSQGADLLSVSSSEDQAFPILDVAHNSRPDRMWIG
LHQLDSSQGWQWSDGSPLNNVRWDNGMPHTSILRESDCGFMNSKNYYESEICDKKLPYIC
KKNVNVTQSVATEPLVYKSTICDEGWAPWNTFCYKLVKDEPKMFAQAENYCKTIGGGLVS
LHSLDSMEMISTQFHAGTPHTQRNQSRDVLGVWIGLNGTGNPAILSWVDETPVSFTYWDR
NHPIQPSGHSHCVYYFGESHGWRVGSCTQELPFMCQKKGEVNESSTTGCPPEGDWRRHGN
SCYKVDSKEVSFRDRCDLTINNRFEQAFINRLLAEEINVKRQYFWTGLQDIKTTGEYQWV
AQDGSETNVAYTNWGVFEPALAGGCAVMSTANPLGKWVVKNCTMFKAGSICKRDIAAPQP
LEPEPDPNLPCPDGWTSRPGISYCYKVFHEERLSRKRSWEEAERFCEALGAHLPSFNHPQ
EMKALHYVMRDSISDDRFFWVGLNRRNPAAGSWEWSDNRPVSMAIFPQEFHEDDEYNRGC
TAFKTLKGTLKSFFVFLMHEFPHLPFYATPFHCDVRLEWVCQIPRGKTPENPEWYNPGGH
HETSIFIDGNEFWFVTEPKLPYEEASLYCNSNGSKLAAPQSSNAAIQIHNNLPQMSAGKQ
SWWVDVRDAGHYFPIRLPLMQNYQATFLGRCTTISDKNIFPEYEYSCELQLPFVCERHNT
TAIETHSGEPHPNGLPCESGYLRFRDKCYVVITPLYVTFQHANEHCQSMRGTLLTITDQV
EQDFVTSLLPAQPRKTWIGLKLKQQDPEWVDDSPVSYLNFNPLLHGLRRPMLVNFHDPES
MELCVFMFNDPSSAMMGSWDYTPCSNQQHVAICQHYADKPEEPQFQLEPFQVNNHTFKLL
QKNMTWHEALAECRNQNMVLASVADTLQQSVLTVHVTRARSPMWIGLFSADDGVHYRWTD
HSHTVFSRWSSEPTVGHCVFLDTDGFWKATECMEQLAGAICHVPHEENVTTHEDNAVNCP
HKSSGPNWIPFKNNCYTFQLASSRWEEFDKGQILQTCKKLAPDADILTIRNVVENEFVKE
QLLPFKDLVQFVWLGVFNDDNDNQMKWYDGTNVQYSNWVDGRPSFSASDEFMAGLNTDGV
WKIFTNKHHFSPFKQRSIVACKLDKDSKDQYNQLARDFERYGNLSYHVITRKLSWFQALE
ECGRGNGHLASVHGTRHNAHIELIAKRDGFPLWIGLSSQDASSSQSYEWSDGTKYHYSQT
GLSDTVVTSSSDPQSVCVYITPHGTWMRMDCNAKLDGAICYNTTVTTPTQRSNLAAPQVA
NNCPQNSGSQNSGSKWVEHQDHCYAFDMTFYNYSVYSMEDAKSICERLDAQLLTIMTREE
NDFVSGYMADNPLITSRVWLGMDLDKQGQPVGWVDGSSLAFSNWETKGSASGVRTATQQN
PCAVMVSADGGIWSRVSCKDSHSRIVCKVPARSGSAPVVLVFFLVVLTSLLAAIGFIVYK
KSRARFNSTVRYRRTIDDADSTSIMDAE
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgacactccaagcaacattttacctatgttttttcttattcttttgtgataaaacgatt
tgttttggaacttgcgcatcaactacatattccggtaacgacaccttcaccatacagcat
gtgagcacagggaagtgcctggtggctacgtccacgtctgggactggagtttccgggata
gcaggggctaagtctggagggtccgggttcaacgtgaccctgggggagtgtgacggctcc
agggggtcccagtggaagtgggggtccggccaccgtctcttccacgtgggcacgtcccag
tgcttgggtctggaggagaagaccaaggccctgtctctgttcagctgtagccccatggag
aacaccatgctgttgtggcgctgcctggactgggccatctatacggtagaccagatgggc
ctcacagtgaccgacgggctggtcagtgccaagcgtgactcctcagacgcctggaggagg
gatgagtcgaccgataatatctgccagcggccgatgcgcattgtccacaccaccaatggg
acgtcgaccggggagccctgtgaatttcccttccactacaacggcagctggtaccacgag
tgcctccccgacgaccaatcacctggactatactggtgttccacaacctccgactttgac
gctgacaaaaagatgggatattgtttaaaacatgaggaaggctgcaaggccctgttcgat
ggccctgaggagggaccctgttatgagtttgtgtcccaggtcgcggtgacatggcaggaa
gcgctggactcttgtcgcagccagggagctgacctgctcagcgtctccagctcagaggac
caagccttccccatcttggacgtggcccataacagcaggccagacaggatgtggatcggc
ctacaccagctggactcgtctcagggctggcagtggtcagacggctcacccctcaacaac
gtgcgctgggacaacgggatgccacacacatcgatccttagggagtcagactgtggattc
atgaattcgaaaaactactacgagagtgagatctgcgataaaaaacttccctacatctgt
aagaaaaacgtcaacgtcacccagtcggtagcaacagagcctttggtgtataaatccacc
atatgtgacgagggctgggccccttggaacacgttctgttacaagctggtgaaggatgaa
ccaaagatgtttgctcaggccgagaattactgtaagaccatcggaggaggcctggtcagt
ctacacagcctggacagcatggagatgatcagcactcagttccatgcaggtacaccgcac
actcagagaaaccaatcacgagatgtgttgggcgtgtggatcggtctgaacgggacgggg
aacccagccatccttagctgggttgacgagacacctgtctccttcacctactgggacagg
aatcatcctatccaaccctcaggacactctcactgtgtctactactttggagagtctcat
ggctggagggttgggagctgtacccaggagctgcctttcatgtgtcagaagaaaggagag
gtgaatgagtcttctacgacaggatgccctcctgaaggggactggaggagacatgggaac
tcgtgctacaaagtggactctaaagaagtgtcgttcagggacaggtgtgacctcaccata
aacaacaggtttgagcaggccttcatcaatagactccttgcagaagagatcaacgtaaag
agacagtatttctggacgggcctccaggacataaagactacaggggagtaccagtgggtc
gctcaggatggctcggaaaccaacgtcgcatacaccaactggggcgtgtttgaaccagcc
ctagcagggggctgtgcagtgatgtccacagccaatcctctgggtaaatgggtggtaaag
aactgcaccatgtttaaagctggctccatctgtaagagagacatcgccgctccacagccc
ctagagcctgagcctgaccctaacctcccctgtcccgatggatggacatccaggcctggc
atttcctactgctacaaggtgttccacgaggagaggctgagtcgtaagcggtcctgggag
gaggcagagaggttctgtgaggccctgggggcccatctgcccagcttcaaccacccacag
gagatgaaagccctgcactatgttatgagagactccatcagtgatgaccggttcttctgg
gtggggctgaacaggagaaacccagctgctggttcctgggagtggagcgacaacaggcct
gtgtccatggccattttcccccaagagttccacgaggatgacgagtacaaccggggctgc
acagcctttaagacactgaaaggaaccttaaagagtttttttgtcttcctgatgcacgaa
ttccctcatctgccattctacgccaccccattccactgtgacgtcaggctggagtgggtc
tgccagatcccccgtggaaaaactcccgagaacccagagtggtacaatcctggtgggcac
catgagacgtccatattcattgacggtaacgagttctggtttgtgacggaaccaaagctg
ccatacgaggaggctagtttgtactgcaacagcaacggcagcaagctggcagcaccacaa
agctccaacgcagccatacagatccataataatctgccacagatgtcggcagggaagcag
agctggtgggtggatgtaagagacgctggacactacttccccataaggttaccccttatg
caaaactaccaggctacgttcctgggcaggtgtacaactatcagtgacaagaacatcttc
ccagagtacgagtacagctgtgagctgcagctgccattcgtgtgtgagagacacaacacc
acggctatagagacccactctggagagcctcaccccaatggtctgccctgtgagagcggc
tatttacgcttcagggacaagtgctacgtggtgatcacgcctctgtacgttacttttcaa
cacgccaacgagcactgtcagtcgatgagaggaactctactcactatcacagaccaagtt
gaacaggactttgtgacctccctgttgccggcgcagccacgtaagacgtggattggcctg
aaactcaaacagcaggacccagagtgggtggatgactccccggtctcctacctcaacttt
aaccccctgcttcacggcctacgcaggcccatgctcgtcaactttcatgacccagagagc
atggagctgtgtgtcttcatgttcaacgaccccagctctgctatgatgggctcctgggac
tacaccccctgctctaaccagcagcatgtggccatctgccagcactacgcagacaagcca
gaggagccccagttccagttggagccgttccaggtgaacaatcacacctttaagctgctt
cagaagaacatgacgtggcacgaggctttggcggagtgcaggaaccagaacatggtcctg
gccagcgtagccgacaccctgcagcagtcagtcctcacggtgcacgtcacccgcgcacgc
agccccatgtggatcggcctcttcagcgcagacgatggtgtccactaccgctggacagac
cacagtcacacggtgtttagtcgctggtcctcagagcccaccgttggacactgtgtcttc
ctggacacggacggcttctggaaggctacagagtgtatggaacagttggcaggggctatc
tgccatgttccacacgaagagaacgtcaccacccatgaggacaacgctgtgaactgtcct
cacaagagcagcggaccaaactggatccccttcaagaacaactgctacaccttccaactg
gcatcgtccagatgggaagagtttgacaagggccagatacttcagacatgcaagaaactg
gctcctgatgcagacatcctgaccatcaggaacgtagtggagaatgagtttgtgaaggag
cagctccttcccttcaaagacctggtgcagtttgtctggctaggggtgttcaacgatgac
aacgataaccagatgaagtggtatgacggtacaaacgtccagtactctaactgggtcgat
ggaagaccaagcttctcagccagcgatgagttcatggcaggtctcaacactgacggagtc
tggaagatattcactaacaaacaccacttcagccccttcaagcagagaagcatcgtggcc
tgcaaactggataaagactctaaggaccaatacaatcagttggccagggactttgagcgc
tatggcaacctgagctaccacgtgataaccaggaagttgagctggttccaggccctggag
gagtgtggccgtggcaacggacacctggccagcgtgcatggcaccaggcacaacgctcac
atagagcttatcgccaagcgagacggcttcccgctgtggatcggtctgtccagtcaggat
gctagtagctctcagtcttatgagtggtccgatgggactaagtatcactacagtcagacg
ggactctctgacactgttgttacgtccagctcagaccctcagagtgtctgtgtgtacatc
actccccatggcacctggatgagaatggactgcaatgccaagctggacggagccatctgc
tacaacacaaccgtcaccacccccactcagagatcgaacctcgcagctccccaggtggcc
aacaactgccctcagaacagtggctctcagaacagtggctctaagtgggttgagcaccag
gaccactgctatgcttttgacatgaccttctataactactctgtgtacagcatggaggat
gccaagagcatctgtgaaaggcttgatgcacagctgctgaccataatgaccagagaggag
aatgactttgtctctggctacatggcagacaaccctctcatcaccagtagggtgtggctc
ggcatggacctggacaaacaaggtcagccagtgggctgggtggacggttcctctctggcc
ttctctaactgggagaccaagggttctgctagtggggtgaggacagcgacccagcagaac
ccctgtgctgtcatggtgtctgcagacggaggcatatggagcagagtcagctgcaaggac
agccacagccgcatcgtctgcaaagtacccgcacggtcagggagcgccccggtggtgctg
gtcttcttcctggtcgtcctcacctctctcctggcggccatcggcttcatcgtttataag
aagagcagggccagattcaactccaccgtgcgctacaggaggaccattgatgatgctgac
agcactagtattatggatgcagagtga
DBGET
integrated database retrieval system