Oncorhynchus keta (chum salmon): 118363187
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Entry
118363187 CDS
T09424
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118363187
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118363187
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118363187
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
118363187
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Lipase_GDSL_lke
Motif
Other DBs
NCBI-GeneID:
118363187
NCBI-ProteinID:
XP_052344644
LinkDB
All DBs
Position
30:59238569..59249286
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AA seq
751 aa
AA seq
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MSSPMLLLPLLLFLGLRVVNAAAETRRPCSDLLPLDLLSRVLSRAGEGARGVTGGRVHLI
QSGGVMGVRLSRPHPSLDFPSSQHLVNCHLFPREFSIVTTLKVSLVAPKKNEYIFSVVEE
KEEEDARIGKRKGETQGGTDGDWYREKDGERGGRDDESDEERDGETDGGGERLMDGEKRK
GSRDGENSNSQGRLLIGLRFSRDRLHFLFRGRSGGVMARWVFRGIELADDRWHTLVLAFS
GHYATLTVDCNTHLELRVHSKSLPSDLSVQGSRFHIGSRGRWNGLFSGLIRQLVLVPGSD
ATPRVCPSSNPGLAELFVPAVLLDLPQKETRSDLTLPSYESEVRVSVGLEKSCSSLVRGQ
LWFNPIRRALYLCDGTLWVPMLQESQRLDYVLEQQVLSTSSETYDIEVFSVQGLGLMAAM
AHRSPSLGSAVYLWRDGGFHLYQKISTHGALSWRHFTMGKKIFLVVSNSRESTGKEETVE
KDELSVIYRWNKKTQRFVHYQALQTHCARDWEAFRIQGHTYLAVANHRQGNTNHTIDSVV
YKWDRGTQLFVPHQALRTSGAYDWEAFTVGPYHFLAVANAFDGQTTHVDSVIYVWVDGSF
RLFQTIKTFCATDWEMFQIGSRVFLVVANGHQLHGNGPGRYAINSTIYELDMSSQLFLRF
QDIVTYSAVDWEFFTVGEESYLVVANSFDGESHSLNSIIYRWQGYEGFVPIHRLPTIGCS
DWEFFTSGEDSYLIYSSATAPLSKVFRLKTH
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccgatgttgctgttgcctctgctgctgtttctcgggttaagggtcgtcaac
gcagctgcagagacacggagaccatgcagtgacctgcttcccctggaccttctgtcccgt
gttctctccagggcaggggagggggcgagaggggtaacaggagggagggtgcatctgatc
cagtctgggggtgtgatgggtgtccgtctgtcccgtcctcacccttccctggacttcccg
tcctcccagcacctcgtcaactgtcacctcttccccagagagttctccatcgtcaccacc
ctgaaggtcagcctcgtcgcccctaagaaaaacgagtacatattttctgtggtggaggaa
aaggaagaagaggacgcaaggattggaaagaggaagggggagacacagggaggaactgat
ggagattggtacagagagaaggatggagaacgaggagggagggatgatgagagtgatgaa
gagcgggatggagagacagatggagggggagaaagactaatggacggagagaagaggaag
ggaagtagagatggagagaacagcaacagtcaaggacggcttctgattggcctgcggttc
tccagagacagactccacttcctgttcagaggtcgcagcgggggggtcatggcgcgctgg
gttttccgaggcatcgaattggctgatgatcgctggcacacgttggttttagcatttagt
ggacactacgctactctcactgtggactgcaacacacacctggaactcagggttcactcc
aagtcgttgccctctgaccttagtgttcagggttccagattccacatcggcagccgaggg
agatggaatggcctgttctcaggtctgatcagacagctggtcctggtgccaggctctgat
gccacccctcgtgtctgcccatcctccaaccccgggctggcagagctgtttgtgcctgcg
gtactgctagacctaccacaaaaagagactaggagtgacctcacgctgccttcatatgag
tcagaggtgcgggtgtctgtggggctggagaagtcctgttccagtttagtaagaggacag
ctgtggttcaaccccatcaggagagctctctacctctgtgatggtacactctgggtcccc
atgctgcaagagtcccagagactagactatgtcttggagcagcaggtcctctccaccagt
tcagagacgtatgatattgaggtgttcagtgtacaagggctgggtttgatggcagcaatg
gcccaccgctccccctccctgggctctgcagtctacctctggagagatggaggctttcac
ctttaccagaagatcagcacacatggagctctctcctggagacactttacgatggggaag
aagatattcctggtggtgtccaactccagggagagcacagggaaggaggagacagtggag
aaagatgaactgtcagtgatctacaggtggaataaaaagacacagaggtttgttcattac
caggcgctccagacacactgtgcacgggactgggaggccttccgcatccaaggacacacc
tacctcgccgtggccaaccacagacaaggtaataccaaccacaccatagacagtgtggtc
tacaagtgggaccgtggtacgcagctgtttgtaccacaccaggccctgcggacctctggg
gcttacgactgggaggccttcacggtcggaccttaccacttcctggctgtggcgaatgcg
tttgacggacagaccactcacgttgactcggtcatctatgtctgggtggatggaagtttc
cgcttgtttcagaccattaagacgttctgtgccacagactgggagatgttccagatcggc
agcagggtcttcctggtggttgctaacggacaccaactccatggcaatggccccggtcgc
tatgccatcaactcgaccatctacgagctggacatgagctctcagctgttcctgcgtttt
caggacatagtcacatacagtgctgttgactgggagttcttcacagtaggagaggagagt
tacctggttgttgcaaactcctttgatggagagtctcactctctgaacagcattatctac
aggtggcagggatacgaggggtttgttcccattcaccggcttcccaccatcggatgcagc
gactgggaattctttacttccggagaggattcctatctgatctactccagcgccacagca
cctctctccaaagtcttccgtctgaaaacacactga
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