Oncorhynchus keta (chum salmon): 118363256
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Entry
118363256 CDS
T09424
Name
(RefSeq) integrator complex subunit 5-like isoform X1
KO
K13142
integrator complex subunit 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118363256
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
118363256
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Motif
Other DBs
NCBI-GeneID:
118363256
NCBI-ProteinID:
XP_035599824
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All DBs
Position
30:19935016..19964022
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AA seq
1017 aa
AA seq
DB search
MCAVFDGTSLTVTMQTSLTHTPQNAFSPQELSQEIKSFISGVDQTQGRKLSVREHARCAV
RLLRSVPACRGAVLEHLRGVYNEHVSAFLHNLETNGDGDGDSNLEDVITEVHGVLAEFIK
LNPRAWAPLVSTWAVDLLGQLSSKHAGRRAAPHSSSLNELLQLWMSCAATRSLMEAYTQC
LAAMIAWCPDQCVDALLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLACGLKDFCSHGTA
DKCQGDKSSRVPKIGSVVGILGHLAARHSDSIRRELLRMFQESLSPPTIPPSSGSTSLEH
SAQLRRATVPFLLQLAALSPSLLGAISTELVESLRPPVLLQLQAVLQGLPRDELDNMLGL
AVHLIAQSPAGGARILRFLADTATPASVIISGPTSSPHEGVREACDLLLQMLLLHLHKLV
YTRSEGDDGYYSRPHSPSSQAPRVVPFLEELQSHVGELCAEMLRLERKRHLWLHQLLCLL
CLLSVYGGPSVATEALCQLLTLARNPDQLALAWQLHTPLSACLPGLIPAAVIRCVAQIHT
HTLGPRQLCQLLLNLGSAMQSVQEEERRGPGGGMGGGGASPQSSMAVQVGAAVSGHLHDF
CPLLLHGDPAVSHAAVRLLSRSPLPRAALPSHLLLVCRAAVTHFFLALRRRGETGKGRDE
GQGGEAVNCSVLLLSRLVGYSPLTLKYVLQHLVEGALHKGNTDLFGGQSEDIGGDTPISP
SLAPDRVGSLLDINCRFGTTVNFSGSVWSVFHAGVIGKGLKQRSATPHPDAASVIQNVQT
LLAVTVQCCSAPSGNGGNGGGTRHQPSVPDEPPPINAEAAKMMAVTLVEYICPDVANGEL
SWPPEEHARTTVERDIHIRRCFEAHPVLFPLLHVVAAGRPALCYCSAVLRGLLATLLAHW
EASRESLAMDSPWHLQASCMLVSCMGEGQLLPPVLGNVHEAFPYLTPFEVRLLLLAVWEY
VRGNGPMPQKFVFSAEKGLFCRDFSRDGDVARYVAPIHSVLHKNIDRLGHLCWRFQL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcggtgtttgacgggacttccctgacagtcaccatgcagacctctctcactcac
acaccgcagaatgcatttagcccccaggaactgtcccaggagataaaatccttcatcagt
ggcgtggaccagacccagggtcgtaaactcagcgtccgtgagcatgcccgctgtgccgtg
cgtctactacggtctgtgcctgcctgtcgcggggcggtcctcgagcacctaaggggcgtg
tacaacgagcacgtctcagcctttcttcacaatctagaaacaaacggcgatggcgacggg
gactccaacctggaggatgtcatcacggaggtccatggcgtcctggcggagttcattaag
ctcaacccccgagcctgggctccccttgtctcaacctgggctgtagacctgctggggcag
ctgagctccaagcatgctggccgcagggcagctccccactcctccagcctaaacgagctg
ctgcagctgtggatgtcttgtgcggctacacgctccctcatggaggcctatacccagtgc
ctggcagctatgatagcctggtgtcctgaccaatgtgtggatgctctcctggacacctcc
gtgcagcactccccccacttcgactgggtggtggctcacatcggatcctccttcccgggc
accatcatcagccgtgtcctggcctgtggccttaaagacttctgttcccacgggacggct
gacaagtgtcagggagacaagagcagccgagtgcctaagatcggctctgtggtggggatc
ctaggccacctggcagcgcggcactctgacagcatccggcgggagctgctgaggatgttc
caggagagcctcagtcccccgactataccccccagctctgggtccacctccttggagcac
tcagcccagctccgcagagctacagtgcccttccttctccagctggcggcgctgtctcct
tctcttctgggcgccatatctacagagctggtggagtctctacggcctccagtcttgctc
cagctccaggctgttctacagggccttcccagggacgagcttgacaacatgctggggctg
gctgtccacctcatcgcccagagccctgctggaggggcacgcatcctccgcttcctagct
gacacggccacccctgcctctgtcatcatctctggccctacgtcttcccctcacgagggg
gtccgggaggcctgcgacctcctcctccagatgctcctgctgcacctccacaagctggtc
tacacccgctcagaaggggatgacggctactacagccgcccccactcgccctcctcccag
gcgccccgtgtggtccccttcctagaggagctgcagtcccacgtgggagagctctgtgct
gagatgctgagactggagaggaagcgtcatctctggctgcaccagctgctgtgtctgctg
tgtctgttgtctgtatacgggggccctagcgtagccacggaggccctctgtcagctgctc
accctggcccggaacccagaccagctggccctggcctggcagctccacaccccactgtcc
gcctgcctgccgggcctcatccctgccgcagtgatccgctgcgtggcccagatccataca
cacaccctgggacccaggcagctctgccagctccttctcaacctgggctctgccatgcag
agtgtacaggaggaggagaggaggggcccaggaggaggcatgggaggaggaggtgctagt
cctcagtcctccatggcagtgcaggttggagcagcggtctcagggcacctccatgacttc
tgtcctctgctcctccacggtgacccggccgtatcccacgctgccgtgcggctcctgtcc
cgcagccccctcccccgtgctgccctgccttcccacctgttgcttgtttgtcgggctgcc
gtcacacacttctttctggcactgcggaggagaggagagacagggaaggggagagacgaa
ggccagggaggagaggcggtgaactgttcggtgctcctcctgtcccgtctggtaggttac
tctcctctaaccctcaaatatgtcctgcagcacctggtggagggagctctacataaagga
aacactgacttgttcggagggcagagtgaggacattggaggggacacccccatctccccg
tccctggcccctgaccgggtgggctccctgctggacatcaactgcaggttcggcaccacg
gtcaacttctctggcagtgtgtggtctgtgttccatgctggggtgatagggaagggtctg
aagcagcgcagcgctacgcctcaccccgacgccgccagtgtcatacagaatgtccaaact
ctgctggctgtcaccgtccagtgctgcagtgcaccatccgggaatggcggcaacggtgga
ggcacccgacaccagccctccgttccagacgagccgccgcccatcaacgctgaggcggcc
aaaatgatggcagtgacgctggtggagtatatctgccccgacgtagccaacggggaactg
tcatggccgccagaggaacatgcacgcacaactgtagagcgtgacatacacatccgccgc
tgcttcgaggcccaccctgtcctcttccctttactccatgttgtggctgccgggcgtcct
gctctctgttactgttctgcggtgctccggggcctgctggccactctgctggcccactgg
gaggcttcgagggagtctttggcgatggactccccgtggcacctccaggcctcatgcatg
ctggtgtcctgtatgggtgagggccagctgctgccccctgtgctgggcaacgtccacgag
gctttcccctacctgacgccgttcgaagtgaggcttctcctcctggctgtgtgggaatat
gtaaggggtaacggccccatgccacagaagtttgtcttcagtgccgagaagggcctgttc
tgccgggatttctcgcgggacggagacgtagcgagatacgtagcacccattcacagtgtc
cttcataagaacattgaccgcctggggcatctatgctggcgtttccagctctga
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integrated database retrieval system
