Oncorhynchus keta (chum salmon): 118363406
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Entry
118363406 CDS
T09424
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04210
Apoptosis
oke04218
Cellular senescence
oke04620
Toll-like receptor signaling pathway
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke04623
Cytosolic DNA-sensing pathway
oke04625
C-type lectin receptor signaling pathway
oke04920
Adipocytokine signaling pathway
oke05132
Salmonella infection
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118363406
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118363406
04218 Cellular senescence
118363406
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118363406
04621 NOD-like receptor signaling pathway
118363406
04622 RIG-I-like receptor signaling pathway
118363406
04623 Cytosolic DNA-sensing pathway
118363406
04625 C-type lectin receptor signaling pathway
118363406
09152 Endocrine system
04920 Adipocytokine signaling pathway
118363406
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118363406
09171 Infectious disease: bacterial
05132 Salmonella infection
118363406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118363406
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
118363406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
118363406
NCBI-ProteinID:
XP_035600126
LinkDB
All DBs
Position
30:complement(32785975..32810347)
Genome browser
AA seq
927 aa
AA seq
DB search
MAEEEPYLPHQPYNFDIDPLWDPLNFPPMSHSNSLRTVTADGPYLQIIEQPKQRGFRFRY
GCEGPSHGGLPGASSEKNRKSYPNIRIFNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCD
KGICIADLQPKDSSISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNCGIVIHPEMDAFQ
GEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPI
FDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGD
FSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDYSGHGGAGGLYRGPGGGGPATGGGGGFFQGYSTYNNYGTSYNSGFSP
GMSGGGAGIKHAPQGRAEDSGDDSDMDDDPASGAVVGVRAKSEDASAGETSEESGAGVEL
GPGDRTGECVLVARLVDVAERQAEALFQYAVTGDVSYLLAPQRQLMTTQDENGDTGLHLG
VIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQTPLHIAVITQQKAAAEALLLAGADVTL
CDRHGNTALHLAAQQKEGGMVGFLLRHREIVELVDLPNTAGLCSLHLAVLANSLCSLRDL
LVNGGSVEVQERSCGRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHTATGRG
SVKLTALLMAAGADPHKENFEPLFFREHDCCMDEEEEEDEGYIPGTTPLNMAATPEVLEI
LNGKEYKPETNAFVFVPPQGDMQSLGSETKRALCQALECPEDGWEMLAHILGLGILNSAF
RLSSSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVLEGALRETEQAPPAPQSTTKL
LERVCDLKLDGWEDSGVCDSGVELSTA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggagccttacctacctcaccaaccgtacaactttgacatagatccacta
tgggatcccctgaatttccctcccatgtcacactccaactcactccggacagttacagca
gatgggccctacctccaaatcattgaacagcctaaacagcggggcttcaggtttcgttat
ggctgtgagggaccttctcacggcgggctaccaggggcctctagtgagaagaacagaaag
tcctatcccaatatcaggatatttaactatcaggggttggcacgtgtggtggtacagctg
gtgaccaactctaaagatgcccacctccatgcccacagtctggtgggcaagcagtgtgac
aagggcatctgcatcgcagacctacagccaaaagactccagcatcagtttccccaacttg
ggcatcctccacgtgaccaagaagaacgtgagtaagacactggaggaccgtatgtctgag
gcctacaggatgggctacaactgcggtatcgtcatccatcccgagatggacgccttccag
ggagagttccgcatcccccgagagctcactgatcaccagagaaatctgatcagcagcgca
gcgtcctaccaggctaaagagatggacctgagcgtggtgcgcctcatgttcacagccttc
ctcccagacagtgacgggggcttctcccgtagactggaccccgtcatatcagaccccatc
tttgacagcaaagctccaaatgcatctaacctgaagatagtgcgcatggaccgaacagct
ggctgtgtgactggaggagaggaggtctacctgctctgtgacaaggttcagaaagatgac
atccaggtgcgcttctatgaggatgacgagacggggctgacatgggaggcctttggggac
ttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaatacaga
gacctgaacctccagaaacccacctcggtgtttgtgcagctgaagcgtaaatcggacaat
gagacgagcgagcccaagcccttcacctaccatccgcagatcatagataaggaagaagtg
cagaggaagagacagaagaccctgcctaacttccaggactacagcggccacggtggagca
gggggcctgtaccggggaccagggggggggggtcccgctacaggtggaggaggaggtttc
ttccagggctattccacctacaataattatggcaccagctacaactctggcttttcccct
ggcatgagtggtggcggggcaggaattaaacatgctccacaaggcagagcggaggacagt
ggtgatgacagtgacatggatgatgacccggcctcaggggcagtggtgggggtccgagcc
aagtcagaggatgcctctgctggggagactagtgaggagagcggggccggtgtggagcta
ggaccaggggacaggactggagagtgtgtgctggtggccaggctggtggatgttgctgag
aggcaggctgaagccctcttccagtacgccgtcactggtgacgtcagctacctgctggct
ccacagcgccagctcatgactactcaggacgagaacggtgacactggtctccatctgggg
gtgatccacagccagacagacgcagtcaggagtctagcccaggtcctctctgccctgcct
ggagaggaggtccttaacatgagaaacaacctctaccagactcctttgcacatagcggtg
ataacacagcagaaggctgcagctgaggccctattattggctggggctgatgtcactctg
tgtgatcgccacggaaacacagctcttcacctggccgcccagcagaaggagggaggtatg
gtgggatttctactgagacacagagagatagtggaactagtggacctacccaacacagca
ggactgtgctccctccacctggctgtgcttgccaacagcctgtgttccctcagggacctc
ctggtgaacgggggcagtgtggaggtccaggagaggagctgcggccgcacggcgctccat
ctggccactgagctggacaacgtctccctggcaggctgcttgctactggaggggaatgct
gatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcggggc
tctgtcaagctgactgctctcctcatggctgcaggtgccgatcctcacaaagaaaacttt
gagcccctgttcttcagagagcatgactgctgtatggatgaggaagaggaggaggacgaa
ggctacatcccagggacaactcctctcaacatggctgccactcctgaggtgttggaaatc
ttgaatggaaaagagtacaagcccgagaccaacgccttcgtcttcgtcccccctcaaggt
gacatgcagagcctgggctcagaaacaaagcgggcactatgccaggctctggagtgcccg
gaggatggctgggagatgctggcacacatactgggcctgggcatcctcaacagtgccttc
agactcagctcctcccccgcaagcacgctgctggacagctacgaggtgtctggaggaaag
gtcaaggaccttttggagggactcaggactgtagggaactgctctgctttgacagtactg
gagggggcactgcgtgaaacagaacaggctccaccagccccccaaagcaccacaaaactc
ttagaacgtgtgtgtgatctgaagctggacggatgggaggacagcggagtgtgtgacagt
ggggtggagctctccacagcgtga
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