Oncorhynchus keta (chum salmon): 118363429
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Entry
118363429 CDS
T09424
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118363429
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118363429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118363429
NCBI-ProteinID:
XP_035600180
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All DBs
Position
30:complement(34465595..34467314)
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AA seq
297 aa
AA seq
DB search
MYNMMETEIKSPLPQSNSGSAAGNKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQDQLAYPQHHSPQIQQMHRY
EMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSADHPSLQTSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagagcccactcccgcagtccaattcgggttca
gcggcgggcaacaagaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgtggacagcggagaaagatggcacaagagaaccctaaaatg
cacaactctgagattagcaagcggctcggtgcagactggaaacttttgaccgacgcggag
aagagacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccg
gattacaaatatcgtccccgcaggaagaccaagaccctgctcaagaaagacaagtattct
ttgcctggaggacttctggcgccaggtgccaacgctgtcaacaacggcgtctcggtggga
cagcggatggacagttatgctcacatgaatggctggaccaacagtgcgtactctctcatg
caggaccagttggcctaccctcagcatcacagcccacagattcagcagatgcaccggtat
gagatggcagggctccagtaccccatgatgtcctcggcgcagacctacatgaacgcagca
tccacgtacagcatgtcccccgcatacacgcagcaaacctccagtgccatgggcttgggt
tccatggcctccgtgtgcaagaccgagccgagctcaccacctccggcgattacttctcac
tcccagagagcgtgtttgggggacctgagggatatgatcagcatgtacctgcctcccggt
ggcgacagcgcggatcacccgtccctgcagaccagtcggttacacagtgtacatccgcac
tatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatttga
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