Oncorhynchus keta (chum salmon): 118363485
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Entry
118363485 CDS
T09424
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118363485
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118363485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
118363485
NCBI-ProteinID:
XP_035600283
EnsemblRapid:
ENSOKEG00005027473
LinkDB
All DBs
Position
30:36080611..36087240
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AA seq
1240 aa
AA seq
DB search
MGAKMNTPRGNIVSSTALLLFLVGIMQDVSGKTLKYKVYEEQKVGTVIARLKEDVAGVLS
KLPSSVSFLFRAMQRGSTPFLSVREEDGEITIGTKIDREKICEKNLNCSIEFDVITLPTE
YLQLFHVEVEVLDINDNSPQFSRAIIPIEISESASVGNRIQLDSATDPDVGDNSLYSYSL
TPNRFFKIDIRTRNDGAKYAELVVVKELDREVQSNYQLQLTASDNGVPPKSGSTLLKISI
SDSNDNSPAFDEQAYVINLMENSPLGTLLIDLNATDPDEGTNGKIVYSFSSHVSPKILET
FKINPENGQITLIKKVDYESTSSYELDIQAQDLGPNSIPGLCKIVIKVVDVNDNKPEINI
NLMTPGKEEVAYISEGVPVDTFIALVRVDDSDTGLNGDVVCRLHGHGHFRLQKTYEKNYM
ILTNVSLDREKRSEYSLTVIAEDRGSPSLSTVKHFTVQVLDENDNPPRFEKSRYEVFKSE
NNSPGAYLMTVVASDPDLGTNGQVTYTVVEALVQGSPISTYVTIDPSNGAIYALRSFDHE
DVSRIAFTVQARDGGNPALSSNATVLLTVLDDNDNPPTIQSPPLRNHTADLPLWRHASAG
QLVTIIKATDRDTGANGELSCSIVGGNEEGLFVMDARRCELRTNGSLEGVPKDVLEIRVE
VQDRGTTRLSTGALLRLSLQENMNILPPGLPTGPSHPSLDLSLIIIISLGAVCALLLVVM
VMFTTARCNREKKDPRNSYNCRVAENTYQNHPKKPSRQIHKGDITLVPTVNGTLPVRAHP
RSPSASPAPERGTMGSRQSQHSRQSLNSLVTISSNHVAENFALELAHATPPVEQVSQLLS
MLHQGQYQPRPSFRGNKYTRSYRYALNDMDKFSLKDSGRGDSDAGDSDYEAGRESPIDRL
LGEAFTELYPPDGQHRPHPQHPHAAMRLCTEECRVLGHSDQCWMPPLTSPASSDYRSNLF
IPGDDPHQARDPEQPPQSSDPTHPHAQRSNQSFSTFGKDNQEGAEEGEAEDEGEDGEDLC
GTTSLLSEMSSVFQRLLPPSLDSYVQVSETQKGGASVGGVSVPMTGSLDRRRSHLPGKPS
AAAHQQGVAAWAANTHFQNPGSSIGPSGHPHPQNGSYHTLKPSTKLSPQNNHKNQVVGHG
QHAPTPKNSPLLTALVSPTLVVPSLAPAPIPVPVPLPGPCGKWLPAMEEIPENFEEDEFD
SVLGQLGHLQGKRSDSRHELMDASELVAEINKLLQDVRQS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaaaatgaatacacccagagggaatatagtatcttccactgcgctattatta
tttttggttggaattatgcaggacgtttctggtaagactttgaaatataaagtttacgaa
gagcaaaaagtgggcacagtgattgcaaggctaaaggaagacgtggcgggtgttctttcc
aaattaccgagttcagtgtcctttctgttccgtgctatgcagcgggggagcactccgttt
ctgtcggttcgggaggaggacggtgaaatcaccatagggaccaagattgaccgggagaag
atttgtgaaaagaacctcaactgttccatcgaatttgacgttatcacgctgcctaccgaa
tacctccagctcttccacgtcgaggtggaagtcttggacattaacgataactcgccacag
ttctctcgtgccatcatacccattgagatctccgagagcgcatctgtgggaaaccggatc
cagctggacagcgccacggacccagacgtgggagataactccctttactcttattctctg
acaccgaatcgctttttcaaaatcgacattaggaccagaaacgatggtgccaaatacgca
gagcttgttgtggtgaaagagctggacagggaggtgcagtccaactaccagttgcagcta
acggcctcggacaatggagtccccccgaagtccggctccactttgctcaagataagcatc
tcggactcgaatgacaacagtccggcttttgacgagcaggcttacgttattaatctcatg
gaaaactcaccactagggactctactgattgatttaaacgccacagatccggatgagggc
acaaacggtaaaatagtttactctttcagcagtcatgtctctcccaaaatactggagacg
tttaaaattaaccctgaaaatggtcaaatcactttgattaaaaaagtggactatgaatct
acatcatcttatgagctggacattcaggcacaggatctgggtcccaactccatccctgga
ctttgtaaaatcgtaatcaaagtggtggacgtgaacgacaacaaaccggagatcaacatt
aacctgatgactcctggaaaggaggaggtggcctacatctcggagggcgtgccagtggac
acctttatagcactggtgcgggtggacgacagtgacacggggctcaacggtgacgtggtg
tgccgcctgcacggccacggtcacttccggctgcagaagacctatgagaagaattacatg
atcctgaccaacgtgtctttggacagagagaagaggtcagagtacagtctgacagtcata
gctgaggaccgtggctctccaagcctctccacagtcaaacacttcactgtacaggtgttg
gatgaaaacgataacccgcctcgctttgagaagagtcgctacgaggtcttcaagtcagag
aacaactctccaggggcctacctgatgacagtggtggcgtccgaccctgacctgggcacc
aacggtcaggtgacctacacggtggtggaagctctggtccagggaagccccatctccacc
tacgtcaccatcgacccgtccaacggcgccatctacgctctacggagcttcgaccacgag
gacgtcagccgtatcgccttcaccgtccaggcccgtgatggagggaaccccgccctctcc
tccaatgccaccgtcctcctgaccgtgctcgacgataacgacaatccgcccaccatccag
tccccacccctacggaaccacaccgcggatctacctctctggagacacgcctccgccggt
cagctggtcaccatcattaaggccaccgaccgcgacaccggtgccaatggcgagctgagc
tgctccatcgtcgggggcaacgaggagggcctgtttgtgatggacgcgcggcgatgcgag
ctgcggaccaatggcagtctggaaggggttcccaaggatgtgctggagatcagggtggag
gtgcaggacaggggcaccactcgcctgtccacgggggccctactccgcctttccctccag
gagaacatgaacattctgcccccaggcctccccacgggcccaagccatccatcactggac
ctctccctcatcatcatcatctccctgggggccgtgtgtgccctgctgctggtggtcatg
gtgatgttcaccacggcacgctgcaacagggagaagaaggacccacgcaactcatacaac
tgcagggtggcagagaacacgtaccaaaaccacccgaagaagccctctaggcagatccac
aagggagacatcaccctggttcccactgtcaacggcaccctgcccgtacgggcacaccca
cgctcaccttctgcttcacctgccccagagaggggcaccatgggcagccggcagagccaa
cacagccgccagtcgcttaacagcctagtcaccatctcctccaatcacgtcgcagagaac
tttgctctggaactggcccacgccacgccccctgtcgagcaagtctcacagcttctgtcc
atgctccatcagggccagtaccagccaagacccagtttccgtggcaacaaatacactagg
agctacaggtacgctctaaatgacatggataagtttagtctgaaggacagtggtcgtggt
gacagcgacgctggggacagtgactacgaggcagggagagagtctcccatcgacaggctc
ctgggtgaggcctttactgagctttacccccctgacggccaacacagaccccatccacag
catccgcatgcagcgatgagactgtgcactgaggagtgtcgtgtcctgggtcattctgac
cagtgctggatgcctcccttgacctccccagcctcctctgactaccgcagcaacctcttc
atcccaggagatgacccccaccaggccagagaccccgagcaacccccacagtcctctgac
cccacccaccctcatgcccaacgcagcaaccagagcttctccacctttggcaaggacaac
caggagggggccgaggagggagaggcggaagatgagggagaggatggggaggacctctgt
ggaaccacctccctgctgtcagagatgagcagcgtgttccagaggctcctccccccgtcg
ctggactcctacgtccaggtcagtgagacccagaagggaggtgcgagtgtggggggtgta
agtgtcccaatgacggggtcattggacaggaggaggagtcacttgccaggtaagcccagt
gctgcagcccaccagcaaggtgtggcagcgtgggctgccaacacccatttccaaaacccc
ggatctagcatcgggccctcaggccatccacacccccagaacggcagctaccacaccctc
aaacccagcaccaagctcagcccccagaataaccacaagaaccaggtcgttgggcacgga
cagcacgcccccacccccaagaacagccctctcctcactgccctggttagccctaccctg
gtggtaccctccctggcccctgcccccatccctgttcctgtccccctcccggggccttgc
ggtaagtggctccccgccatggaggagatcccagagaactttgaggaggatgagtttgac
tctgtgctggggcagctgggacacctgcaggggaagaggagcgacagccgccatgagttg
atggacgccagcgagctagtggctgagatcaacaaactgttacaggacgtccggcagagc
tag
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integrated database retrieval system