Oncorhynchus keta (chum salmon): 118363486
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Entry
118363486 CDS
T09424
Name
(RefSeq) protocadherin-10-like isoform X3
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118363486
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118363486
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
118363486
NCBI-ProteinID:
XP_035600287
EnsemblRapid:
ENSOKEG00005027445
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All DBs
Position
30:complement(36655641..36668129)
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AA seq
955 aa
AA seq
DB search
MIVLFLLLCITNGVVSQIRYSVPEEADHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFVNERIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NAPVGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVCGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKVTDVNDNAPEITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVAKDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMDCDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVKAKDAGSPELSSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETTLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGADLFSNCTEE
CKALGHSDRCWMPSDGRQAADYRSNLHVPGMDSVPDTERGKGFASSFRVDIPETA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttcttctgtgtattacgaatggagtggtctcgcagatacgctac
tctgtgccggaggaggcggatcacggcaccttcgtggggaatatcgccgaggaccttgga
ctggacatgaccaaaatcgcctcgcggcgcttccaggtggtgcctagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcgtcaacgaaagaatagaccgggag
cagatctgtaagcagagtgccagctgcctattacaccttgaagtgtttctggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatataaatgacaatccgcccagcttc
cccgagaccgacatcaccgtggagatttcagagagcgctacccccggtacccggttccct
cttgagagtgcattcgatccggacgtgggctccaatgcgctgcgcacgtacgacatcacc
accaataactacttctacctggatgtgcagacgcagaccgacgggaacaaattcgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggcccacaggtacgtgctaact
gcggtggacggggggcagcctccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccggtgtattcggtgagccttcaggag
aacgcaccggtggggaccctcgttatccaactgaacgccaccgacttggacgaggggcag
aacggggagatagtgtattcattcagcaaccacatatccagccgcgtcaaggatctgttc
gccatagatgcgcgcactggacgcatcgaggtgtgcggtgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatcttggacccaatgccgtggctgcacac
tgtaaagtcctggtgaaagtgacagacgtaaatgacaatgctcctgagatcacctttagc
accgtgactgagtcggtgagcgagagggcagccccaggaaccgttatagccctgctgagc
gtgacggacaaagatgccgaggaaaacggaaagattcatgtggaaatcctcggcgatgtc
ccgttcaaactcaaaccctccttcaggaactatttcaccattgtaacagacggacctcta
aatagggagaatgccgactcttattcagtgactgtagttgccaaggatacagggacccct
tccctcgcaaccagtaaatcaatcaaagtgcaagtctcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggacccagacgttggacagaacgctctcattagttactcc
ataatggattgtgatattcagggtatgtctgtcaaaacatatgtgtcaatcaatgaggaa
acgggctacctttacgcactcagatcattcgattacgagcagcttaaagacttcactttc
atggttaaggcgaaagatgcaggtagccccgagctctcctcgaacgccacggtcaaagtg
atcatcgtagaccagaatgacaaccctccctcagtcattgctcctctgggtaaaaatggc
actgcgagagagccgctgccccgctccgcagagcctggctacctggtgacccgtatcgtc
gccatggacgcagatgacggcgagaacgcacggctctcctacagcatccagagggggaac
gagaacggcatgttccgtatggactggaggacaggagagctgcgcactgcccggcgcgtc
tcaaccaagcgggaccctaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagcgtggtggag
gaccaccgggagaggggcaccgccaagtccaaggagaccactctggacctcaccctcatc
ctcatcatcgccctgggttctgtctccttcatcttcctgctggctatgatcgtgctggcg
gtgcgctgccagaaggacaaaaagctaaatatctacacgtgcctcaccagtgattgttgc
ctcgggtgcgcaacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tctgatatcatgctggtgcagagcgccaacgtcaccggggccggtacagcccaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgactccggagtctgccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacaccgaacacaacccgtgcggggccatagtgacagggtacactgaccag
caacctgacatcatatcaaacggcagcattttatcaagcgagaccaaacatcagcgagcg
gaactcagttacctggtggatagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgttagctcgaaagacagtggtcacggtgacagcgaacagggcgacagtgaccat
gacgccaccaatcgaggtcactctaccggcgctgatctcttctctaactgcacagaggag
tgcaaggctctgggccactccgaccgctgctggatgccctccgacgggcgccaggcggca
gactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgacactgagcgagga
aaagggttcgctagctcctttcgcgtggacataccagagaccgcatga
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