Oncorhynchus keta (chum salmon): 118363492
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Entry
118363492 CDS
T09424
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118363492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118363492
03016 Transfer RNA biogenesis [BR:
oke03016
]
118363492
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
118363492
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
118363492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
118363492
NCBI-ProteinID:
XP_035600295
LinkDB
All DBs
Position
30:complement(37264067..37270210)
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AA seq
498 aa
AA seq
DB search
MMMGHQNDEEEGGNKDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGNSPLVLAFPL
SSGRALRDVSPLDRSPSPNSRRSLHSEQVLDLEYDDEVLEEWMILGGEEQEGDGDIQLNL
GYWSSSSSESHSGTEDEELNAKYALKHNWAIIEKDKPRPYRYFSSDRSLTCHNCNKTGHL
AKGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYQPCPEPPFWNQHCHRCGMA
GHLSDACPDTWRQFHFTTQQEVPLRPHVDHTHKHCRHTAHCYNCSRRGHLGHECTQRRMV
SGTFASLPYVCHYDNKQDIVKLNTRIHRKARELRVEGFMPLLEHQRTYVTPGGSSEEERP
SPAPGRRRSLEGRRKTWPERRRERREVKKLRREAQARRAVGTTKWGSDEIVYTRDHFKNL
HREPIPPPQKKRRREERRESKSEERSRKGRSKESSRKNREAERWKKRGGLKRGYLYSRDD
LGPMNDYLISPQNRVRIL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagagggtggtaataaagacaacagattctac
atcgaggcctccagtagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccaagagctccccaggccactggaggaaactctccactagttctggccttccctctc
tcgtctggccgggctctacgggacgtgtcgccactggacaggagcccaagcccgaactcc
aggcgaagcctccactcagagcaggtcctggacctggagtatgatgatgaagtcctagag
gagtggatgatcctgggaggagaggagcaggagggagatggggacattcagctcaacctg
gggtactggagcagcagcagctcagagtctcattctggaacagaggatgaagaactgaat
gcaaaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccatac
cgctatttcagctctgaccggagtctcacctgtcacaactgcaacaaaactggacacctg
gccaagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggc
catgtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacacggg
taccagccctgccctgaaccccctttctggaaccagcactgccaccgctgtgggatggct
ggccacctatcagatgcttgtccggatacatggagacaattccacttcacaactcagcag
gaggttcccctcaggccacacgttgaccacacccacaaacactgcagacacaccgctcac
tgctacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatggtc
agtgggacgtttgcctcgctcccctacgtctgtcactacgacaacaagcaggacatcgtc
aaactgaacaccaggatacacagaaaagccagagagctaagggtggagggcttcatgcct
ctgttagagcaccagaggacctacgtgacaccagggggcagtagtgaagaggagcggccc
tccccagctccagggaggaggagaagcctggagggcaggaggaagacgtggccggagaga
cgcagggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagggcggtt
gggacgaccaaatggggctcagacgagattgtttacaccagggaccattttaagaacctc
cacagagaacccatacctccccctcagaagaagagacgccgtgaggaaaggagggagagc
aagagtgaggagaggagtaggaagggcagaagtaaagagagcagtaggaagaatagagaa
gcagagaggtggaagaaaagaggagggctgaagcgtgggtacctgtactcccgtgatgac
ttgggacccatgaatgattacctcatctccccccaaaatagggtgcgaattttataa
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