Oncorhynchus keta (chum salmon): 118363538
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Entry
118363538 CDS
T09424
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118363538
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
118363538
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
118363538
NCBI-ProteinID:
XP_035600387
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Position
30:38263987..38278558
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AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCLKLQGPGTPQCFTIRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
SYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGAGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMWWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDRSHGDDGHDNANVAVIDGEKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTGKLSEPAAGLGGFRSVTHTPQLKTTY
RVAVDQEEPLALRLLLWLREDVFLAVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVNDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINYINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactattcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
agctatcttccagaggatggtggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacagaggttgggatccatcaggatgactttggagcggggaagtttatcaca
gtgggttgggggaagaaagagacacagttccatggctcagagggcaagcacgctgcccag
aggaagactatagaggtgcagccggccatgtggtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtatttcggc
agtgacccccagagggcaccggcctacgtgagctgggatcctgagaggcccctgcggctg
cacctggtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggatgacgggcatgacaacgccaacgtggccgtgatcgacggcgagaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgccccagtcaacctggtgaccttccagcgccagagaaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgggaaactgagtgagcct
gcagccggattgggaggattccgatctgtcacacacacccctcagctgaagacaacctac
agggttgcggtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagag
gatgtgttcctggcggtgggggcctgtacagacgggccgtcccagtccaagatgctcatc
cttggaccctcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcactgcag
ctggaggacggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaatcaactttccagatccctgtgtgcagacagccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtcaacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgctgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcaggatagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaattacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcggcttgtgggaaaaaggtggatattgtctgtgatgcgttgcgctgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgct
gccaacgcagtgagtgcagaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaggagcacttcacagaggccctgaatctggtgaaggaccag
aggctgtatagtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcagagcaggcagggttgttg
ctgtggcgctgcggtgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaac
ttcaaaccagctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggctctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag
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