KEGG   Oncorhynchus keta (chum salmon): 118363538
Entry
118363538         CDS       T09424                                 
Name
(RefSeq) elongator complex protein 1-like
  KO
K11373  elongator complex protein 1
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oke03016]
    118363538
Transfer RNA biogenesis [BR:oke03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    118363538
SSDB
Motif
Pfam: Beta-prop_ELP1_1st A-sol_ELP1 HB_ELP1 Beta-prop_ELP1_2nd TPR_ELP1 Beta-prop_WDR19_1st Beta-prop_EML_2 Beta-prop_WDR35_TULP_N TPR_GEMI5 Beta-prop_NUP159_NUP214 B-prop_COPA_B_2nd TPR_9
Other DBs
NCBI-GeneID: 118363538
NCBI-ProteinID: XP_035600387
LinkDB
Position
30:38263987..38278558
AA seq 1322 aa
MRNLRLLKSLRCLKLQGPGTPQCFTIRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
SYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGAGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMWWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDRSHGDDGHDNANVAVIDGEKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTGKLSEPAAGLGGFRSVTHTPQLKTTY
RVAVDQEEPLALRLLLWLREDVFLAVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVNDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINYINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNFKPALLEACSSQASYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSI
LK
NT seq 3969 nt   +upstreamnt  +downstreamnt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactattcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
agctatcttccagaggatggtggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacagaggttgggatccatcaggatgactttggagcggggaagtttatcaca
gtgggttgggggaagaaagagacacagttccatggctcagagggcaagcacgctgcccag
aggaagactatagaggtgcagccggccatgtggtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtatttcggc
agtgacccccagagggcaccggcctacgtgagctgggatcctgagaggcccctgcggctg
cacctggtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggatgacgggcatgacaacgccaacgtggccgtgatcgacggcgagaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgccccagtcaacctggtgaccttccagcgccagagaaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgggaaactgagtgagcct
gcagccggattgggaggattccgatctgtcacacacacccctcagctgaagacaacctac
agggttgcggtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagag
gatgtgttcctggcggtgggggcctgtacagacgggccgtcccagtccaagatgctcatc
cttggaccctcagaggcccagggcccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcactgcag
ctggaggacggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaatcaactttccagatccctgtgtgcagacagccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtcaacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgctgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcaggatagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaattacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcggcttgtgggaaaaaggtggatattgtctgtgatgcgttgcgctgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacacgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgct
gccaacgcagtgagtgcagaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaggagcacttcacagaggccctgaatctggtgaaggaccag
aggctgtatagtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcagagcaggcagggttgttg
ctgtggcgctgcggtgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacataattgaaacgaac
ttcaaaccagctctcttggaagcatgtagttctcaggcctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggctctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag

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