Oncorhynchus keta (chum salmon): 118363543
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Entry
118363543 CDS
T09424
Name
(RefSeq) protein transport protein Sec24B-like isoform X2
KO
K14007
protein transport protein SEC24
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118363543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118363543
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118363543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
TSTD2_N
Rhodanese_C
zf-Sec23_Sec24
Gelsolin
Rhodanese
Zap1_zf1
DUF629
Motif
Other DBs
NCBI-GeneID:
118363543
NCBI-ProteinID:
XP_035600399
LinkDB
All DBs
Position
30:38634083..38657642
Genome browser
AA seq
1528 aa
AA seq
DB search
MMTTDDMACNELINIDVDTLAPHDLKQEKLQLSATLRKYYSFCKRRTFGTFVASKRASTT
VWNCCGQTFKELSSIHKHVARTHDTDIHQLTQSTFEVLLSQIEKEATSQQQSTEKEPVDI
SSWIPDTSHITGDQLHKPAMGDAECFCDLRVGVYKEIVPMGVDRDALFYSLAGTQLEPEE
FHKEVEALLSKGDSCNDTILLDCRNFYESRIGQFSQCLAPNIRKFSYFPDYVDQNLDLFR
DKKVLMYCTGGIRCERGSAYLRSKHVCKEVYQLKGGIHKYLEQFPEGFYRGKLFVFDERF
AIFSNSDIISECRYCNSPWDQYQLCSTHFCCQLVLSCSACRQGGHTKGKGEEPPATPPQR
EECPVGQTYPSTYPPGYYGAGPQQQGYPTISGHCAPAPNKSPITNNDHSAYYHHNSHQQP
IAAPTVAPSAYRVTQGSHPPSQPYGTLPTSVAPPNPQQAPPFQQTSPYAPHGAYHGQQQY
LPSQALIYPQQLNLVSATPSSQGTPMYPIVSYPSAPGSSQYGTLRSSQAPTGPGAISNLI
GAPLHQYPPGNGTSHPASTAAVPSGHSMAPPGQPATVNGQGNAVQAPVLQHYDQSHQAAM
AHDHYGVTHNTGGADGDRPPSGTPFTSSPGHQQGMHYGYVANSGASSANASTNAAPLSSS
SDEDVDEEEDEEAGGDSSSTTTGSASPVPNSYDSLEGGNYPESSIPPSADMTKQAPPFGY
GYPSMQPAYQQRPSPRTDSSPSHGSYNQTGYQHLSQPFPNMSQLSAALGGLSGVPELEVE
ALRPVNLLQERNLLPHRPLDAPEPNLNADLKKANCSPDTFRCTLTNIPQTQALLNKARLP
LGLLLHPFRDLAQLPVITSSTIVRCRSCRTYINPFVSFLDQRRWKCSLCYRVNDVPDEFM
YNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVDAGYLDVFC
QTLLENLDKMPGDTRTRVGFITFNSTIHFYNLHESLSQPQMLVVSDIDDIFIPTHDSLLV
NLKESRALVRVLLTSLPGMFSQTRETHSALGPALQAAYKLMSSTGGRVSVFQTQLPTLGA
GLLQSREDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYSDLASLACV
SKYSAGSIFYYPSLHHVHNPAQLDKFQKDLERYLTRKIGFEAVMRIRCTKGLSIHTFHGN
FFVRSTDLLSLANVNPDSGFAVQMSIEESMADTSLACFQAALLYTSSKGKRRIRVHTLCL
PVVSQLSDVYAGADVQAITCLLANMAIDRSISSSLSDARDALVNAVVDSLSAYKNTVSNL
QQSGLIAPAALCLFPLYVLALLKQKALRTGTSTKLDERVFAMCEFKSQPLQQIMRTVHPD
LYRLDTISDQGALHLNDCIVPQPHLLHLTAEKLTREGAFLMDCGSVFYLWIGKCCNDMFI
RDVLGCPNHASIPPNMTQIPELETPLSERLRALLAWLQDSRTFSSTLHVLKDDASAKTSF
FQHLVEDRSESAFSYYEFLLHIQQQMTK
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaccgatgatatggcatgcaatgagttaattaacatagatgttgacaccctt
gccccccatgatttaaaacaagaaaaactccaactttctgcaactctacgaaagtactac
tcattctgtaagaggaggacatttggtacatttgtggcatccaaaagagcttcaacaaca
gtttggaattgctgtggccagaccttcaaggaactttcttccatccataaacatgtggca
aggactcatgacactgacattcaccagcttacccagtccacatttgaggttttactgagc
cagattgagaaagaagccacttcacaacaacaatcaacagagaaagagccagtggacatt
tcctcctggatacctgacaccagtcacatcactggtgaccagcttcacaaaccagcaatg
ggggatgcagagtgtttttgtgacctgagggttggagtctacaaggaaatagtgccaatg
ggagtggaccgtgatgccctcttctacagtctagcaggtactcaattggaacctgaagaa
ttccacaaagaagtggaggctcttttgtcaaaaggtgactcttgcaatgatacaatactg
ctggactgccggaacttctacgagagtagaattggccagttcagccaatgtttggcccct
aacatccgaaaattcagttacttccccgattacgttgaccagaaccttgacctctttcga
gacaagaaggtccttatgtactgtaccggtggcattcgctgtgaacgcggctcagcctat
ctccgctcaaaacatgtgtgtaaagaggtttatcagctgaaaggtggcattcataagtac
ctggaacaattccctgagggcttctatcgcggcaaactgtttgtgtttgacgagcgcttt
gcaatcttctccaacagtgacatcatctcagagtgtaggtactgcaattctccgtgggac
cagtaccagctatgctccacacacttctgctgccagctggttctttcctgctctgcctgc
agacagggtggtcacaccaagggcaagggagaagagccccctgccacacctccacagaga
gaggagtgtccagtaggacagacctacccatccacatatcctccggggtactatggagca
gggcctcaacagcagggctacccaaccatttctggacactgtgcccctgcccccaacaaa
tctcccattacgaacaatgaccacagtgcttactaccaccacaacagccaccagcagcct
attgctgcacctactgtagccccctctgcatacagagtaactcaaggctcccatcctccc
tctcagccctatggcacccttcccacctcagttgcccctccaaacccccaacaggcacct
ccattccaacaaacatccccctacgcaccgcatggggcctaccatggacagcagcagtac
ctcccctcccaagcgctaatctatccccagcagcttaacttggtgtcagcgacccccagc
agccaaggcactcccatgtaccccattgtctcgtacccctctgcaccaggaagcagccag
tatggcactttgcgttcctcccaggctcccaccggcccaggagccatttccaacctgata
ggcgctcccctccaccagtatcccccaggaaatggcaccagtcacccagcatctactgca
gcggttccctctgggcatagcatggctccacccggccaaccagccaccgtcaacggccag
ggtaatgcagtccaagccccagtcctccagcactatgaccaaagccaccaggcagccatg
gcacatgaccactacggagtcacacacaacaccgggggtgctgatggagatagaccacct
tcaggaacccccttcacttcctccccggggcatcagcaaggcatgcactacggatatgta
gccaatagtggcgctagctctgccaacgcctccaccaacgctgcccccttgtcatccagc
tccgatgaggatgttgatgaggaggaggatgaggaagcaggtggtgatagttcctcaact
accactggcagtgcgtccccggtgcccaacagctacgactccctggaaggcggcaactac
ccagagtcctccattcccccctccgctgacatgaccaaacaagccccgccctttggctat
ggctaccccagcatgcagccagcttatcagcagaggccgtcccccaggacagactcctcc
ccctcacacggcagttacaaccaaactggctaccagcatttgtcacagcccttccctaac
atgtcccagctgtctgcggccctgggggggctgagcggtgtgccagagctggaggtggag
gcgctgcggcccgtcaacctgctgcaggagaggaaccttctgccccaccggcccttggat
gcccccgaacccaacctcaacgctgacctcaagaaggccaactgcagcccggacacattc
aggtgtaccctgaccaacatcccacagacccaggccctgctgaataaagcccggctgcct
ctgggcctcctcctgcaccccttcagagacctcgcacaactcccagtgatcacgtccagc
accatagtgagatgtcgctcctgtcgtacctacattaaccccttcgtctccttcctggac
cagaggagatggaaatgcagcctctgctacagggtcaacgatgttcccgatgagttcatg
tacaatcccgtgacccgatcctatggagagccccacaagaggccagaggtgcagaactcc
acggtggagttcatagcctcttcagattacatgctgcggcctcctcagcctgcagtgtac
ctgtttgtgctggatgtgtctcacaacgcggtggatgcaggctacctggacgtcttctgt
cagaccttactggagaacctggacaagatgccgggggacacgcgtacccgagtgggcttc
atcaccttcaacagcaccatccacttctacaacctccacgagagcctctcgcagccccag
atgctggtggtctccgacatcgacgatatcttcattccaacccacgacagtctactggtg
aacctgaaggaaagcagagcgctggtgagggtcctgttgacctccctacctggcatgttt
agccagaccagggagacccacagtgccctgggcccggcgctgcaggctgcctacaagctc
atgtcctccacagggggccgcgtctccgtgttccagacccagctacccacgctgggtgcc
ggcctgctgcagtcccgggaggaccctaaccagaggtccagcaccaagggggtccaacac
ctgggcccagccacagacttctacaagaagctggccctggactgttctggtcagcagata
ggagtggacctcttcctcctcagctcccagtactctgacctggcctcactagcgtgtgtg
tctaaatactcagcgggtagtatcttctactacccctcgttgcaccacgttcacaacccg
gcccagctggacaagttccagaaggatctggagcgctacctcaccaggaagatcggcttc
gaggctgtcatgaggatacgctgcaccaaaggcttgtccatccacacattccatgggaac
ttctttgtgcgctcgacggacctgctgtccctggccaatgtcaacccagactcgggcttt
gctgtgcagatgtctatagaggagagcatggccgacacctcactggcctgcttccaggct
gcactgctgtacacctccagcaaagggaagaggcggatcagggtccatactctgtgtctg
ccagtggtcagccagctgagtgatgtatatgccggggctgacgttcaggcaatcacctgc
ctcctagccaacatggccattgaccggtcgatatcgtcaagcctttcggacgcccgggat
gccctggtgaatgcggtggtggactccctgagtgcatacaagaacacagtctcgaatctg
cagcagtctggcctcatcgcccccgcagccctctgtctcttccccctctacgtgctggca
ttactcaaacagaaagcactgcgcacagggaccagcacaaagctggacgagcgcgtcttc
gccatgtgcgagttcaagagccagccgctgcagcagatcatgcgcacagtccaccccgac
ctctaccgcctggacaccatttcagaccagggggcgctccacctgaacgactgcatagtg
ccccagccccatctgctgcaccttacggctgagaagctgaccagagaaggcgctttcctc
atggactgtggcagtgtgttttacttgtggattggtaaatgctgtaatgatatgttcatt
cgagacgtgctgggctgcccaaaccatgcttcaataccccctaacatgacccaaattcct
gagctggaaacccctctgtctgaacgactgcgcgcactcctcgcctggctacaggactcg
cgaaccttcagctcaacacttcacgtcctgaaggatgatgcttcagctaagaccagcttt
ttccagcacttggtagaggacaggtcggaatcggccttctcctactacgagttcctgctc
cacatccagcaacagatgaccaagtag
DBGET
integrated database retrieval system
