Oncorhynchus keta (chum salmon): 118363580
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Entry
118363580 CDS
T09424
Name
(RefSeq) TBC1 domain family member 9B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118363580
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118363580
Endosome - Golgi transport
Rab GTPases and associated proteins
118363580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
118363580
NCBI-ProteinID:
XP_035600458
LinkDB
All DBs
Position
30:47722898..47744839
Genome browser
AA seq
1231 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFWSIACGSSRKEITGHWEWLESNLLQTLSIFDNDEDITTFVKGKVSGIIA
EENKSKAAQEDEDSGKFREAEQKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSFLLGKEVTLVVQWTEVTRLEKNATLVFPESVRVSTRHTEHYFSMFLNINDTFKL
MEQLATIAMRQLLDNEGFSADRTLPKACKTLKNVSALKRDLDARAKNERYRALFRLTPDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDKLWSDGHPLALSGYSVSPSPS
TTPLSSSLPTPTGAGGEPSQGRHYSPSLPTATQGLLRIYQKDDPEDHGPKATKEKMKEES
WNIHFFEFGRGVCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMATHPGYYAELVEQ
AMGRCTLATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTS
VLLLYCTEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQELG
VISTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLGCSDEG
EAMTILGRYLDNVVNKQTVSPPIPHLHALLTSGDEPPPEIDVFQLIKSSYDKFGGLRADV
IEQMRFKQRLKVIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVLFKAKHIMSCYWGASC
TAAERHDPSLPYLEQYRIDLEQFCQLFGALGTWLCGTHTVTLAARHFRLLDSNKDGLINF
KEFVTGLSGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEAAQFFTDDDSPQESPFLSD
LDFLVQEVTSGEEMKEVGEASGCGDAEEKKEVKDYKYYLRMWAKEKEPKIETIKDLPRMN
QEQFIELCKTLYNMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNGAKKPTDTTYTQ
APILSSELPQPEKEESNGESSSGQSLVCKALAEAQLETPPQQTSDEEVKDDTSVSSYSMV
STGSLQCEDIADDTVLIGCAGDQQRRGSTLDGDWSITFEQVLASMLTEPPLVDYFEKKGD
FQARMATCKMQRGVERQVSSSSDHELAQLST
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtggataactccggaggaggtgttgctggccaacgctctgtgggtgagcgaaagggcg
aacccctttttcattctccagcggagaaagggccatggaaaaggagggggcatcactgga
ttgttggtgggcaccatggacgtggtcctggactcaagtgccagagtggctccctatagg
atcctgcaccagacaggggactcccagatcttctggagcatcgcttgtggctcctcccgg
aaggagatcacggggcattgggagtggctggagtccaacctgctccagacgctctccatc
ttcgacaacgacgaagacatcaccaccttcgtcaaggggaaggtctcgggcatcatcgct
gaggagaacaagagcaaagcggcccaggaggacgaggactctggcaagttccgcgaggcc
gagcagaagatgaggaagctgtttggcatgcccggcgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccgccagggctgggtctacctcagcgtcaac
cacctctgcttctactccttcctcctggggaaagaagtgaccctggtggtgcagtggacg
gaagtgacacgtcttgagaagaacgccacgctggtgtttccggagagtgtgcgggtgagc
acacggcacacggaacactacttctccatgttcctcaacataaacgacaccttcaagctc
atggaacagctggccaccattgccatgcgccagctgctggacaacgagggcttctccgcc
gaccgcacgctgcccaaggcatgcaagacgctcaagaacgtctctgcactcaagagggac
ctggacgcacgggccaagaacgaacgctaccgggcactgttccgcctgaccccggacgag
cgcctggacggacacacagactgcacgctgtggacgcccttcgccaagatgcacattgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcatccccctcagagaggtgtccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaagaccgcgacttcctggtccagcgtatctccgacttcctgcagcgcacacctgacaag
ctgtggagcgacggccacccgcttgccctcagtggctattcagtttctcccagccccagt
accaccccactttcctccagcctccccacacccactggcgcaggaggggaaccgtcccag
gggcgccactacagtcccagcctgccaacagccacacagggcctgctccgcatctaccag
aaggacgacccagaggaccacgggcccaaagctaccaaggagaaaatgaaagaggagtca
tggaacatccacttctttgagtttggcaggggggtgtgtatgtaccgtacctcgaagacc
agagagctggtgctcaacggtatccctgagagcctccgaggggagctgtggctgctcttc
tcaggagctcagaatgagatggccacccaccctggctactatgctgagctggtggagcag
gccatgggccgctgtaccctggccacggaggagatcgagagggacctgcaccgctccatg
cccgagcaccacgccttccagaatgagatgggcatcgctgccctccgcagggtcctcacc
gcctacgcctgccgcaaccctggcataggatactgccaggcgatgaacattgtgacgtcg
gtgctgctgctgtactgtacagaggaggaggccttctggctgttggtcgctctgtgtgag
aggatgctgccagactactacaacaccagggttgtgggtgctctcgttgaccaaggtgtg
tttgaggagctgactcgtgagtgcctccccctcctctacgagcacatgcaggagctgggc
gtcatctccaccatctccctctcctggttcctcacgctgtttctcagcgtcatgcccttc
gacagcgccgtgctcctggtcgactgcttcttctacgagggcatcaaggtcatcttccag
gtggcactggccgtgctgcacgccaacatggacacgctgctgggctgctccgacgaggga
gaggccatgaccatactcggacggtacctggacaatgttgtcaacaagcagactgtgtct
cctcccattccccacctccacgccctgttgaccagtggtgatgaaccaccacctgagatt
gacgtgttccagctcatcaagtcatcctatgacaagtttggaggtctgcgtgctgatgtc
atcgagcagatgaggttcaagcagaggttaaaggttatccaatcgctggaagacactgcc
aagaggagtgtggtgagggccatcatgaccgactcagcctttagcatcgaggagctagaa
gaactctatgttctcttcaaggccaagcacattatgagctgctactggggggccagctgc
acggcggcggagcgccatgaccccagcctgccctacctggagcagtaccgcatcgacctg
gaacagttctgccagctgttcggggccctgggcacctggctgtgtggcactcacaccgtc
acactggccgctcgccacttccgcctgttggacagcaacaaggacggcctcatcaacttc
aaagagtttgtcacaggcctgagtgggatgtaccatggagacatgacagagaaactgaag
ttactgtacaaacttcacctgccgccagcattgtgtccagaggaggccgagtcggcacta
gaggctgcgcagttcttcactgacgatgacagtccacaggaatctcccttcctgtctgat
ctggacttcctggtgcaggaagtgacctcaggagaggagatgaaagaggttggggaagcg
tcgggatgcggagatgcagaggagaagaaagaggtgaaggactataagtattacctgagg
atgtgggccaaggagaaggagcccaagattgagaccattaaagatcttcccaggatgaac
caggagcagttcatagagctgtgtaaaaccctgtacaacatgttcagcgaggacccactg
gagcaggagctctaccacgccatagccactgtggccagcctgctgctgcgcattggagag
gtgggcaagaagttcaccaacaatggtgccaagaaaccaaccgacaccacctacacccag
gctcccatcctttcctctgaattgccccagcccgaaaaagaagagtcgaatggggaaagc
agctcaggacagtcactggtctgcaaggctttggcggaggcccagctagaaacgccgccc
cagcagacgtcggacgaagaagtgaaggatgacacgtcggtctcgtcctactccatggtg
agcacgggttcgctgcagtgcgaggacatcgccgatgacacggtcctaattggctgcgcc
ggcgatcagcagcggcgaggcagcacgctggacggcgattggtccatcaccttcgagcag
gtgctggcgtcgatgctcaccgagccgcccctggtggactactttgagaagaagggagac
tttcaggcaaggatggcaacctgtaagatgcaaaggggggtggagaggcaggtgagctcg
tcaagcgaccatgagttggcccagctctcgacctga
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