Oncorhynchus keta (chum salmon): 118363584
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Entry
118363584 CDS
T09424
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118363584
Membrane trafficking [BR:
oke04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118363584
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRRNT
V-set
LRR_9
LRR_LRWD1
LRR_Zer-1
Ig_6
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
118363584
NCBI-ProteinID:
XP_035600470
LinkDB
All DBs
Position
30:47005112..47362673
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AA seq
614 aa
AA seq
DB search
MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYMFQDLNNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLHAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHGLNLTTLFITNTNLSTFPYQAIKHLHYLTLLNLSFNRIRHIEGRM
LSELVHLRELHLVGAQLSTVDPYAFQGLRWLKVFNVSHNRLDTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQRRQSIYFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQPVRLYCSVEGTPRPVVSWLSPRRRLLTNKSHGRVMVHNNGTLEIKA
AEVQDGGVYLCMATNTAGNDSLMTSLAVKSLGSLYANRTQYYTDPSNATTNGTINVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSLDGGA
EGEAGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagtaaagtcatgctgcacacggccctctcatgctggcaaccgttc
ctgggactggctcttgtggccgtcttcgtgggttccgccttgggatgtcccgcccgctgc
gactgctcggcccagagcaagtcggtcctgtgccaccgcaaacgcctacctagcatccca
gacggtatccccatcgagaccaggatcctggacctgagcaagaacaagctgcaggccgtc
aacccggatgactttgccccctatcctggtctagaggatttggacctcagtgggaacatt
attagctatgtggagccgggggccttcaaccctctgtacagtatgcactcccttagtctc
aaaagcaatcgtattaagctcattcctatgggtgtcttcacaggcctgtccaacctcacc
cggttggatgtcagcgacaacaatattgtcatcctgctggactacatgttccaggacttg
aacaatctgaagttcctggaggtgggtgacaatgacctagtgtacatctcccaccgggcg
ttcagtggactgctgagcctagagactctaaccctggagagatgcaatctgacagtggtg
cctactgaggccctgtcccacctgcacaacctggtaagacttcacctgcgatacctcagc
atcagcaccttgcatgcctactccttcaagaagctgttccgattgcgccacctggagatt
gacagctggacctcgctggacagtgtgccggccaacacgctgcacggcctcaatttgacc
acgcttttcatcaccaacaccaacctatccaccttcccatatcaggcgatcaagcacctg
cactacctgacgctcctcaacctgtccttcaaccgcatcagacacatcgaaggcaggatg
ctgtcggagttagtgcacctaagggaactgcatctggtcggggctcaattgtcgactgtt
gatccgtacgcatttcagggcctccggtggctcaaggttttcaacgtctcccacaaccgt
ttggacaccctggagaagggtgtcttccaagctcctgaggctctggaggtactcttgatc
gatgacaaccccctggtttgcgactgccgcctcatgtggatcctgcagaggagacagtcc
atctactttggtgactcgcagccggagtgcagtacccccgagggcatccgcggcaggcct
ttcagggagttcaaggagaccctgctctcctactatgtgacgtgcaccaagcccaaaata
cgggagaacaagacgcaaacaattgccgtagacgaaggtcagccagtgagactgtactgc
agtgttgaggggacccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagccacggtagagtcatggtccacaacaatgggacgctggagatcaaggca
gccgaggtgcaggacggcggggtgtacctttgcatggcaaccaacactgcgggtaatgac
tcattaatgacctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaatgccactaccaatgggactatcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggttgtttcacattcctgggggtggtt
ttgttctgcttcctcctcctgtttgtttggagtcggggcaaagggaagcataaaaacaac
atagatattgaatacgtacctcggtccaagtctaatggcacctctttagatggaggagcg
gagggggaagctggaccccgtcgctttaacatgaaaatgatctaa
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