KEGG   Oncorhynchus keta (chum salmon): 118363764
Entry
118363764         CDS       T09424                                 
Name
(RefSeq) integrin alpha-M-like
  KO
K06461  integrin alpha M
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04514  Cell adhesion molecules
oke04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118363764
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118363764
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118363764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118363764
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118363764
   04515 Cell adhesion molecules [BR:oke04515]
    118363764
   04090 CD molecules [BR:oke04090]
    118363764
   00536 Glycosaminoglycan binding proteins [BR:oke00536]
    118363764
Membrane trafficking [BR:oke04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118363764
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118363764
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin alpha subunits
   118363764
CD molecules [BR:oke04090]
 Proteins
  118363764
Glycosaminoglycan binding proteins [BR:oke00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   118363764
SSDB
Motif
Pfam: VWA ITGAX-like_Ig_3 FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_2 FG-GAP_3 vWA-TerF-like
Other DBs
NCBI-GeneID: 118363764
NCBI-ProteinID: XP_035600867
LinkDB
Position
3:3241610..3291168
AA seq 1141 aa
MTMDWIIPLSFYLSVPQGALSFNIDPVAWKYVSEPAAGFGYKVVQNNPSSLLISAPLDQY
KQNRRGQVYRCLVRDSSCIPLSIREPSHGINMSLGLSMTKDPESLNTMVCGPTIPRECKS
ITTYNGMCFEIDQSLNVKQPVPSSLEECPGQTDIAFLLDGSGSVNKFDFEKMKDFVKDLI
REFLERDTKFAVAQYSGYCTIHFDLNTFNVMNRDYQVNSIAQQGGGTYTAASMIKVVQEV
FSTSRGSRPKAKRIMIVITDGQSHDSGMLKNAASEAEAKNIIRFAIGVGRAFSSSSARKE
LETIASSPPSNHMFQVDSFQALGQIRDTLQNSIFPIEGSQTTGDSIKMEMAQEGFSSAYI
PTRGFQMGAVGAFQWSGAYQEYTGSTFYPTPQQSQNMEPDSYMGYSMAVATTHTRQFTIL
GAPRFKHTGRVVVLPSRNTDKPIEFSGQIGAYFGAEVCAMDVNKDSYSDLVLISAPMFTD
RDREGRVYVCTINDRSGVVCQLNAEMTLVGDAGQMGRFGTSLAPLPDLNKDGFNDLAVGA
PLENDGQGSVYIFHGTSSGISKIKSQKISASDVQSGLKYFGLSISQTSLDMSLDSLPDLA
VGSKGAVLLLRSRPIVTLMARVFFNPPKIPTNQVDCSTPLRNIAKVCFTMTRQTTDTKDL
QAKINYTLTLDVTRQAPNYRAYILPKIREETNTFTLRLQEQCFSHNFFIEACPEDSLNEL
SNELDFTFEGLPTSPGGLSSSLSPQSPTATYHPLGFEINCGADNNCIDNLKVDFNFTRSS
EVRVGIDEVINVTVSVESREENSYNSHVILKYPAGLSFRKFTILQGRVECNSSDSVGNVM
WGQSDCTIDKPIFKSDSKALLVISYGIDRNSQFGQMMTFTANASSGNAHSPKSELSKVKE
IGVKYSIFVVIKRNEDSTSYVNFTAGKNDLQKHVKQSFEVENYERGFNLTVIIKVPMKLG
DKDIWADPNGIQIQGCQRHKNEEPSATDFVDQLQKNHAVDCSVANCGVFMCKSFIRNLDR
NSYNITGNLSSQWIEQIGLESAQFNLVSSATVDYDRNQYIYYSSDSKNNPPIQKIETQVE
VYPEVNFTKGVIGGVVGGLLLLALITAGLYKAGFFKSQLKEMMQNTTEDGPGGDGEAASP
E
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgacaatggattggataatacccctttcattctacttatcagtgcctcaaggtgctttg
tcttttaacattgacccagttgcttggaagtatgtcagcgaacctgctgctgggtttgga
tacaaggtggtacagaataacccatcaagcttgcttataagtgcccccctggatcagtat
aagcaaaataggaggggacaagtttaccgatgtctggtcagagattcatcttgcatacca
ttgtcaatacgagagcccagtcatgggatcaatatgtctcttggtttgtcaatgacaaag
gatcccgagtcactaaacaccatggtatgcggaccaaccatcccaagagagtgcaaatcc
atcaccacctacaatgggatgtgctttgaaattgaccaaagtcttaatgtgaaacaacct
gtcccttcatctctggaagaatgtcctggacaaacagacatagcctttctattggatggg
tcaggaagtgttaacaaatttgattttgaaaaaatgaaagacttcgtgaaagatctgatc
agggaatttctggaaagggatactaagtttgcagttgcccagtattcaggctattgcact
atacattttgacttaaatacgtttaatgtcatgaatcgggattatcaagtgaatagtatt
gctcaacaaggtggagggacttacacggcagcatccatgataaaagttgtccaagaggtc
ttttcaacgagtagaggatccagaccaaaggcaaagaggatcatgatagtcattacagat
ggacaatcacatgacagcgggatgctgaaaaatgcagcctctgaggctgaagccaaaaac
attattcgatttgccattggggtgggcagagccttttcttcttcctcagcaagaaaggag
ttagaaacaattgcctcctctccaccaagcaaccacatgtttcaagtggacagcttccaa
gcacttggccaaatcagggatacattacagaacagcatttttcctattgaaggatctcag
actactggggactctattaagatggaaatggcccaggagggattcagttcagcatacatt
cctacgagaggattccagatgggagctgttggagccttccaatggagcggggcttaccag
gaatacacagggagcactttctaccctacaccacaacagagtcagaacatggaaccagat
agctatatggggtactccatggcagttgctacgacacacactcgccagtttaccatttta
ggtgctccaagatttaaacacactggacgagtggtggttcttccgtccagaaacacagac
aagccgatagaattttctggacagattggcgcttattttggtgcagaggtctgtgcaatg
gatgtgaataaagactcatatagcgacctagtcctcatatcagctccgatgttcacggac
agagacagagagggcagggtatatgtctgtaccatcaatgacaggtctggggtggtctgt
caattaaatgctgagatgacactggtgggggatgcaggacaaatgggcaggtttggaact
tctcttgccccactgcctgacctgaataaggatggatttaatgatttagcagtcggagca
cctctagagaacgatggtcaaggaagtgtctacatattccatgggacgagtagtggaatc
agcaaaatcaaatctcagaaaatttcagcctcagatgtacagtctggattaaagtatttt
ggactgtccatcagtcagacttccctggacatgagtttggattctctcccagatttggct
gtgggatcaaagggggctgttctcttactcaggtccaggcctatagtaacattgatggca
cgagttttcttcaacccacccaaaatccccaccaaccaggtggactgcagtacacctctg
agaaacattgctaaagtctgtttcaccatgaccagacaaacaacagacacaaaagatctt
caagcaaagattaactatactttaactctggatgtgacccgccaagctccaaactatcgt
gcttatatccttccaaagatacgggaggaaacgaacacttttacattaagacttcaagag
caatgcttctctcataacttctttattgaggcttgcccagaggactccctcaatgaactg
tccaatgaacttgacttcacatttgaagggttgccaacatctcctggtggcctcagctct
agcctttccccgcagtctccgactgcaacatatcatcctttaggttttgagatcaactgt
ggcgctgataacaactgcattgacaacctgaaagtggattttaatttcactaggagttca
gaggtgagggttggcatagatgaggtgataaatgtgacagtgtcagtcgaaagcagggaa
gagaactcttacaacagccacgttattctcaaataccctgcaggactttcattcaggaag
ttcaccatactccagggaagagtggagtgtaactcatcagacagtgtgggaaatgtaatg
tggggacaaagtgactgcaccattgacaagccaatcttcaaaagcgattctaaggctctc
ttagtaatttcctatgggattgatagaaacagtcaatttggccaaatgatgacattcact
gcaaatgcctcaagtggaaatgcacactcgccaaagagtgagctttccaaagtgaaagag
attggtgtgaaatacagcatttttgttgtgattaaaagaaatgaggattcaaccagttat
gttaatttcactgctgggaaaaatgatttgcagaaacatgtgaaacaatcatttgaggtt
gaaaattatgaaagaggcttcaatcttactgtgataatcaaggtgccaatgaagcttggt
gacaaagacatctgggctgatccaaatggtatacagattcaaggttgtcaaagacacaag
aatgaggaaccttctgccacagactttgtggaccagctgcagaaaaatcatgctgtggac
tgctctgtcgcaaattgtggggtgttcatgtgcaaaagcttcattcgaaatttggatcgt
aactcttataacatcactggtaacctcagctctcaatggatagaacagattggtcttgag
tctgcccagttcaacttggtcagcagtgccactgtagattatgacagaaaccaatacatc
tattattcttcggactccaaaaataacccacctatacaaaagattgaaactcaggtggag
gtgtatcctgaggttaacttcacaaagggggtcattgggggtgttgtgggaggtctgctg
ctgttagctttgatcacagctgggctttataaggctgggtttttcaaaagccagttgaag
gagatgatgcagaatacaacagaagatggaccagggggtgatggagaagctgcctcgcct
gaataa

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