Oncorhynchus keta (chum salmon): 118363764
Help
Entry
118363764 CDS
T09424
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04514
Cell adhesion molecules
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118363764
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118363764
09142 Cell motility
04810 Regulation of actin cytoskeleton
118363764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118363764
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118363764
04515 Cell adhesion molecules [BR:
oke04515
]
118363764
04090 CD molecules [BR:
oke04090
]
118363764
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118363764
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118363764
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118363764
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin alpha subunits
118363764
CD molecules [BR:
oke04090
]
Proteins
118363764
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118363764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_2
FG-GAP_3
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
118363764
NCBI-ProteinID:
XP_035600867
LinkDB
All DBs
Position
3:3241610..3291168
Genome browser
AA seq
1141 aa
AA seq
DB search
MTMDWIIPLSFYLSVPQGALSFNIDPVAWKYVSEPAAGFGYKVVQNNPSSLLISAPLDQY
KQNRRGQVYRCLVRDSSCIPLSIREPSHGINMSLGLSMTKDPESLNTMVCGPTIPRECKS
ITTYNGMCFEIDQSLNVKQPVPSSLEECPGQTDIAFLLDGSGSVNKFDFEKMKDFVKDLI
REFLERDTKFAVAQYSGYCTIHFDLNTFNVMNRDYQVNSIAQQGGGTYTAASMIKVVQEV
FSTSRGSRPKAKRIMIVITDGQSHDSGMLKNAASEAEAKNIIRFAIGVGRAFSSSSARKE
LETIASSPPSNHMFQVDSFQALGQIRDTLQNSIFPIEGSQTTGDSIKMEMAQEGFSSAYI
PTRGFQMGAVGAFQWSGAYQEYTGSTFYPTPQQSQNMEPDSYMGYSMAVATTHTRQFTIL
GAPRFKHTGRVVVLPSRNTDKPIEFSGQIGAYFGAEVCAMDVNKDSYSDLVLISAPMFTD
RDREGRVYVCTINDRSGVVCQLNAEMTLVGDAGQMGRFGTSLAPLPDLNKDGFNDLAVGA
PLENDGQGSVYIFHGTSSGISKIKSQKISASDVQSGLKYFGLSISQTSLDMSLDSLPDLA
VGSKGAVLLLRSRPIVTLMARVFFNPPKIPTNQVDCSTPLRNIAKVCFTMTRQTTDTKDL
QAKINYTLTLDVTRQAPNYRAYILPKIREETNTFTLRLQEQCFSHNFFIEACPEDSLNEL
SNELDFTFEGLPTSPGGLSSSLSPQSPTATYHPLGFEINCGADNNCIDNLKVDFNFTRSS
EVRVGIDEVINVTVSVESREENSYNSHVILKYPAGLSFRKFTILQGRVECNSSDSVGNVM
WGQSDCTIDKPIFKSDSKALLVISYGIDRNSQFGQMMTFTANASSGNAHSPKSELSKVKE
IGVKYSIFVVIKRNEDSTSYVNFTAGKNDLQKHVKQSFEVENYERGFNLTVIIKVPMKLG
DKDIWADPNGIQIQGCQRHKNEEPSATDFVDQLQKNHAVDCSVANCGVFMCKSFIRNLDR
NSYNITGNLSSQWIEQIGLESAQFNLVSSATVDYDRNQYIYYSSDSKNNPPIQKIETQVE
VYPEVNFTKGVIGGVVGGLLLLALITAGLYKAGFFKSQLKEMMQNTTEDGPGGDGEAASP
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggattggataatacccctttcattctacttatcagtgcctcaaggtgctttg
tcttttaacattgacccagttgcttggaagtatgtcagcgaacctgctgctgggtttgga
tacaaggtggtacagaataacccatcaagcttgcttataagtgcccccctggatcagtat
aagcaaaataggaggggacaagtttaccgatgtctggtcagagattcatcttgcatacca
ttgtcaatacgagagcccagtcatgggatcaatatgtctcttggtttgtcaatgacaaag
gatcccgagtcactaaacaccatggtatgcggaccaaccatcccaagagagtgcaaatcc
atcaccacctacaatgggatgtgctttgaaattgaccaaagtcttaatgtgaaacaacct
gtcccttcatctctggaagaatgtcctggacaaacagacatagcctttctattggatggg
tcaggaagtgttaacaaatttgattttgaaaaaatgaaagacttcgtgaaagatctgatc
agggaatttctggaaagggatactaagtttgcagttgcccagtattcaggctattgcact
atacattttgacttaaatacgtttaatgtcatgaatcgggattatcaagtgaatagtatt
gctcaacaaggtggagggacttacacggcagcatccatgataaaagttgtccaagaggtc
ttttcaacgagtagaggatccagaccaaaggcaaagaggatcatgatagtcattacagat
ggacaatcacatgacagcgggatgctgaaaaatgcagcctctgaggctgaagccaaaaac
attattcgatttgccattggggtgggcagagccttttcttcttcctcagcaagaaaggag
ttagaaacaattgcctcctctccaccaagcaaccacatgtttcaagtggacagcttccaa
gcacttggccaaatcagggatacattacagaacagcatttttcctattgaaggatctcag
actactggggactctattaagatggaaatggcccaggagggattcagttcagcatacatt
cctacgagaggattccagatgggagctgttggagccttccaatggagcggggcttaccag
gaatacacagggagcactttctaccctacaccacaacagagtcagaacatggaaccagat
agctatatggggtactccatggcagttgctacgacacacactcgccagtttaccatttta
ggtgctccaagatttaaacacactggacgagtggtggttcttccgtccagaaacacagac
aagccgatagaattttctggacagattggcgcttattttggtgcagaggtctgtgcaatg
gatgtgaataaagactcatatagcgacctagtcctcatatcagctccgatgttcacggac
agagacagagagggcagggtatatgtctgtaccatcaatgacaggtctggggtggtctgt
caattaaatgctgagatgacactggtgggggatgcaggacaaatgggcaggtttggaact
tctcttgccccactgcctgacctgaataaggatggatttaatgatttagcagtcggagca
cctctagagaacgatggtcaaggaagtgtctacatattccatgggacgagtagtggaatc
agcaaaatcaaatctcagaaaatttcagcctcagatgtacagtctggattaaagtatttt
ggactgtccatcagtcagacttccctggacatgagtttggattctctcccagatttggct
gtgggatcaaagggggctgttctcttactcaggtccaggcctatagtaacattgatggca
cgagttttcttcaacccacccaaaatccccaccaaccaggtggactgcagtacacctctg
agaaacattgctaaagtctgtttcaccatgaccagacaaacaacagacacaaaagatctt
caagcaaagattaactatactttaactctggatgtgacccgccaagctccaaactatcgt
gcttatatccttccaaagatacgggaggaaacgaacacttttacattaagacttcaagag
caatgcttctctcataacttctttattgaggcttgcccagaggactccctcaatgaactg
tccaatgaacttgacttcacatttgaagggttgccaacatctcctggtggcctcagctct
agcctttccccgcagtctccgactgcaacatatcatcctttaggttttgagatcaactgt
ggcgctgataacaactgcattgacaacctgaaagtggattttaatttcactaggagttca
gaggtgagggttggcatagatgaggtgataaatgtgacagtgtcagtcgaaagcagggaa
gagaactcttacaacagccacgttattctcaaataccctgcaggactttcattcaggaag
ttcaccatactccagggaagagtggagtgtaactcatcagacagtgtgggaaatgtaatg
tggggacaaagtgactgcaccattgacaagccaatcttcaaaagcgattctaaggctctc
ttagtaatttcctatgggattgatagaaacagtcaatttggccaaatgatgacattcact
gcaaatgcctcaagtggaaatgcacactcgccaaagagtgagctttccaaagtgaaagag
attggtgtgaaatacagcatttttgttgtgattaaaagaaatgaggattcaaccagttat
gttaatttcactgctgggaaaaatgatttgcagaaacatgtgaaacaatcatttgaggtt
gaaaattatgaaagaggcttcaatcttactgtgataatcaaggtgccaatgaagcttggt
gacaaagacatctgggctgatccaaatggtatacagattcaaggttgtcaaagacacaag
aatgaggaaccttctgccacagactttgtggaccagctgcagaaaaatcatgctgtggac
tgctctgtcgcaaattgtggggtgttcatgtgcaaaagcttcattcgaaatttggatcgt
aactcttataacatcactggtaacctcagctctcaatggatagaacagattggtcttgag
tctgcccagttcaacttggtcagcagtgccactgtagattatgacagaaaccaatacatc
tattattcttcggactccaaaaataacccacctatacaaaagattgaaactcaggtggag
gtgtatcctgaggttaacttcacaaagggggtcattgggggtgttgtgggaggtctgctg
ctgttagctttgatcacagctgggctttataaggctgggtttttcaaaagccagttgaag
gagatgatgcagaatacaacagaagatggaccagggggtgatggagaagctgcctcgcct
gaataa
DBGET
integrated database retrieval system