Oncorhynchus keta (chum salmon): 118363793
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Entry
118363793 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118363793
04082 Neuroactive ligand signaling
118363793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118363793
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118363793
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Chromo
DUF7205
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118363793
NCBI-ProteinID:
XP_035600911
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Position
30:complement(56160563..56190019)
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AA seq
542 aa
AA seq
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MMALSTDKEDKMPSFSTMKHVWISVLLVCITCHVGRGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSCPTPPSRLSIIDGHPAYMVRRLVSVRPRGRSFQYLVDWEG
YDLEERCWVPTKNILDPALIADFHSRHPGQPDAYPVSEVVYLWQTGAAKSVVVAEDGSRL
NQYHLIGQTAGSEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLN
RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN
YFTKRSWAWDGKKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTS
IQLRSSETEVLDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILA
PT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacaaagaggacaaaatgcccagcttttctacaatgaaacac
gtgtggatctctgtcttgctagtgtgtattacatgtcacgtgggtcgtggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacgcgcatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggag
tacaccatcgatgtgtttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccggacaca
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccactcccaacaagctactg
agactgaaggatgacgggacgctgctctacaccatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcacgcttgccctttgaagtttggaagc
tgccccactcccccttcccgtctcagtatcatcgatggccatccggcatacatggtgaga
cgcctggtgagtgttcgacctcggggcaggagtttccagtacctggttgactgggagggt
tatgacctggaggagaggtgctgggtccctactaagaacatcctggacccggccctcatc
gctgactttcacagccggcatcccggtcaaccagatgcctatccagtctctgaggtggtg
tacctctggcaaactggtgctgccaagtctgtagtggtggcagaagacggatcccgtctc
aaccagtaccacctgatcggccagaccgcaggctctgaggacatctacaccagtcgagga
cagtacacagtcatgatgtgtcacttctacctgaagaggaagattggttactttgtcatt
cagacctacatgccgtgcttcatgaccgtgatcctgtcccaggtgtccttctggctcaac
cgtgaatctgtaccagccaggaccgtctttggtgtcactacagtgctgactatgacgact
ctcagtatcagcgctcgcaactcgctgcccaaggtggcctacgccacagccatggattgg
ttcatcgctgtgtgctatgcgttcgtcttctccgcgctcatcgagtttgccaccgtcaac
tatttcaccaagaggagctgggcgtgggatggcaagaaggccatggaggctcagcaccca
aagaaaagggaccctatggtgctttctaagaagcccaacaacgtctgtacagcaggagtg
aactacacccccaacatcactaaggatatctctatctccaccatctccaacagcacctcc
atacaactaagatcgtctgaaacagaagtcctggaccccaagaaaacctacaacagcgtg
agcaaaatcgacaaaatgtcccggatagttttccctgtcctatttggaacctttaaccta
gtgtactgggctacttacctcaacagagaaccggtcatcaaaggagtaaatatattggct
ccaacatag
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