Oncorhynchus keta (chum salmon): 118363926
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Entry
118363926 CDS
T09424
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04810
Regulation of actin cytoskeleton
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118363926
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118363926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118363926
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118363926
Factors involved in mRNA localization
Other mRNA localization factors
118363926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
118363926
NCBI-ProteinID:
XP_052343924
LinkDB
All DBs
Position
30:complement(18666336..18728970)
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSHKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLVTQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDSKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgactctggaggatgctttgtctaacgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccgccttcgtccatcatgtaccaggct
aacttcgataccaactttgaggacaggaatgcgtttgtgacggggatagctcgctacatc
gagcaggcaactgtccactctagcatgaatgagatgctggaggagggccatgagtatgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaatgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtactttcagcgtaaggccattgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaagacttcgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcagctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctctatgtttctagccaatcacaacaggatt
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaatgtcagtaac
atctacaaactagacgccaagaaaaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcgggcctggacagtcacaag
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagctggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggctgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcgatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccttgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagctgaccatggggcgcaggatccagttccccattgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctttggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagaccctgctcaaacagagacacgtacagctcttaggtcgctccatc
gatctgaaccgtctggtcacccagaggatctcagcagccatgtacaagtctttggaccag
gccatcagtcgatttgagagtgaagacctcacctccattgtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaatgtgtctgccccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgttcggactgccatcccctttacccaggagcctcagcgagacaagcctgccaac
gtgcagccgtactacttgtatgggtctaagcctctgaacattgcctactcacacatctat
agctcctacaggaacttcgtaggcccgccccacttcaagaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggagctgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtgatgcctaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacggatgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
atcgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacaaggatccgtagt
tttctgcaggacgccgtgtggcgaggcccgcctcccaccaatggcgtgatgcatgtggac
gagtgtatggaattccaccgcctctggagcgccatgcagtttgtttactgcatacccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgacggtctgaactgggcaggctgt
tccatcatcgtgctgttgggtcagcagcgccgctttgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacagcaaggatgagatcatcaagaacgtgccactgaag
aagatggctgaccgcatcaggaagtaccagatcctgaacaacgaaatctttgccatcctc
aacaagtacatgaaggctgtggagaccgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacatgctga
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