Oncorhynchus keta (chum salmon): 118363940
Help
Entry
118363940 CDS
T09424
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118363940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118363940
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118363940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118363940
NCBI-ProteinID:
XP_052344006
LinkDB
All DBs
Position
30:22420444..22446902
Genome browser
AA seq
388 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLNGGKDFNQPLTITRVTPGSKASLANLCPGDIILAIEGVSTECM
THSEAQNKIKDPASQLGLKIERPETKMWSPQVTEDGKANPFKLNLEAEQQELKPIGTGHN
RRAQPFKAAATIDNGRQVVSSSYNTPIGLYSSGNIQDALHGQLPGLVHDKHEGECPPPQG
LMGNGHQTVVPLSPLDPPLSANSGTDQPLAPSAQYNSPINLYSEANVSAAQQLAQVTSVE
EQVPLSGKTLSSIKESHVYRMLQDDQDRPREPRQSGSFKALQEHVETDGAKPLITRSVRA
PVTKPPTPAGSLQKLPLCDKCGNGIVGTVVKAREKFRHPGCFVCSDCKVNLKQRGYVFVE
GQLYCETHARARTIPPEGHDVITVYPTA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatgtggtcctggatgggccagccccctggggcttcaggctcaatggaggg
aaggacttcaaccagcccctgaccatcaccagggtgacgccaggcagcaaagcctcgctg
gccaacctgtgccccggtgacatcatcctggccatagagggtgtgagtacagagtgcatg
actcacagcgaggcccagaacaagatcaaagaccctgcctcccagctcggcctcaagatt
gagaggcctgagaccaaaatgtggtcaccccaagtcacagaggatgggaaagcaaaccca
ttcaagctcaatttagaggcagaacagcaagagttgaaacctatcggtacaggtcacaac
cgacgcgcccagcccttcaaggctgcggccaccatagacaacggacgccaggtggtgagt
tcctcctacaacacccccataggcctctactcctcaggcaacatccaggacgccttgcac
ggacagctcccaggccttgttcacgataagcatgagggcgagtgccctcctccgcaaggc
ctgatgggaaatggccatcagacggtggtccccctctccccccttgaccctcccctgtct
gctaactccggcacagaccaacccttggcccccagtgctcagtataactcccccattaac
ctgtactctgaggccaacgtctcggccgctcagcagctagctcaggtcacctcagtagag
gaacaggtccctctaagtggtaagacactgtcctccatcaaggagtctcatgtgtaccgg
atgctccaggatgaccaggataggccacgtgaaccacgtcagtcaggctcctttaaggct
ctgcaggaacacgtggagactgatggagcaaagccgttgattactagaagtgtaagagct
ccagtgacaaagcctcctacacctgcgggatcgctacagaaactacccctctgtgacaag
tgtggaaacggcatagtaggcacagtggtgaaggccagagaaaagttccgccaccctgga
tgtttcgtgtgctccgactgcaaagtcaatctgaagcagaggggctacgtctttgtggag
gggcagctgtactgcgagacccacgcccgcgcccggacgatacctccagagggacacgat
gtcatcaccgtttaccccacggcttga
DBGET
integrated database retrieval system
