Oncorhynchus keta (chum salmon): 118364026
Help
Entry
118364026 CDS
T09424
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
oke04148
Efferocytosis
oke04218
Cellular senescence
oke04310
Wnt signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118364026
04310 Wnt signaling pathway
118364026
04020 Calcium signaling pathway
118364026
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118364026
09143 Cell growth and death
04218 Cellular senescence
118364026
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118364026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118364026
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118364026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
118364026
NCBI-ProteinID:
XP_052345294
LinkDB
All DBs
Position
31:complement(3632439..3696863)
Genome browser
AA seq
944 aa
AA seq
DB search
MQDISCLRLSSKFNFGPVLPAALGKERGLQFLNSLATEMKSAEEDAYSYTPNVSLPLGMG
NPCLATQYHTLQSSPIISVSSFHQTGYGLHDHNNHNPAQGYYMSHGLRPNGAPALESPRI
EITAYHQYPEEEAEESSSMDHIVHHKRGVNSIVTLTLPNGDGYRDPSCLSPASSVSSRSC
NSDASSYESGFYNYDNSSQNSPWQSPCVSPKGSSSLLSCPHAPLGPPSTSPRHSPSTSPL
IGAQAEEGWVGQGPCGSSRPNSPACSGGGGSVGVGKRKYSFNGTTYRQPTYSPNQSSTPS
PRGSPRVSVTDDSWLANTNQYTNSAIVAAINALTTDGLVDMGEGVPVKARKTNLDHSPTM
SLKTEPGGEEMGLGSELLQEDYISRLPFKKESYCGGFLDVPQHPYSWSKPKPYLSSLPAL
DWQLPSCSGPYSLQIEVQPKSHHRAHYETEGSRGAVKAPSGGHPVVQLYGYMESEPLTLQ
LFIGTADDRLLRPHAFYQVHRITGKTVSTASHEALQSNTKVLEIPLLPENNMRAIIDCAG
ILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTISLQASSNPIECSQRSAQEL
PLIEKQSLDSYPATGGKKILLSGHNFLPDSKVVFVEKAQDGHHLWETEAKVDKDSFKSTA
LVVEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQRFTYLSPNVPIIKTEPNDEYEPLGAQ
GLSVHSKLYYGQPRLTPIIPVGDADTCLVGVYSPCPPCHGSIGSMPPSPRSSPTLHDLSP
VSYPKCLSTSPTHAHNGPLASAIQETPGLRPAPLVCPSSPDQAPLGMLHSQGNSPHHLGN
PSPHGFHPLYHSSSPSTSPGSDPSTPEGAAESPFAQAPDYSPTQGQSQTQARSSPPSLLP
VDASPRDLAVTVKREPQDLDQMYLDDVNEIIRNDLSSISVHLST
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatatcagctgtttgagactcagctccaaattcaactttggaccagtcctccca
gcggctttgggaaaggaacgaggattgcagtttctcaactctctcgctaccgagatgaag
tctgcagaagaagatgcatatagctacactccaaacgtcagcctgccactgggcatggga
aacccctgtctggccacccagtaccacacgctgcagtccagccccattatctctgtgtcc
tccttccaccagacaggctacggtctccacgatcacaacaaccacaacccagcccagggc
tactacatgtcccacggcctgaggcctaacggggccccggccctggagagtcctcgcatc
gagatcacagcctaccaccagtaccctgaggaggaggcggaggagagcagcagcatggac
cacatcgtccaccacaagcggggggtcaactccattgtgaccctgacgctgccaaacggc
gatggctaccgcgaccccagttgcctcagcccggccagcagcgtgtcatcacgtagctgc
aactcggatgcgtcgtcctacgagtctggcttttacaactatgacaactcatcccagaac
tcgccatggcagtctccttgtgtctctccgaaaggctcgtcctctctcctctcctgccca
cacgctcctctcggccccccctcaacctccccccgccactcgccatccacctcccccctg
atcggggcccaagccgaagagggctgggtgggacaggggccctgtggaagctccaggccc
aactccccggcttgcagcggtggaggtggcagtgttggcgtggggaagaggaaatacagc
ttcaacggcaccacctacagacagccaacctactcgcccaaccagtcgtccacaccttcc
ccgcgcggctcgcccagggtcagtgtcacagacgacagctggctggccaacaccaaccag
tacaccaactctgccatcgtggcagccatcaacgccctcaccaccgacggactggtcgac
atgggcgagggtgtccccgtcaaggcccgcaagaccaacctagaccacagccccaccatg
agcctgaagacggagccgggaggagaggagatgggccttgggagcgagctcctccaggag
gactacatctcccgcctgcctttcaagaaggagagctactgtggaggcttcctagacgtg
ccccagcacccctactcctggtccaaaccaaagccctacctcagctccctgcctgccctg
gattggcagctgccatcttgctctggcccgtacagtctgcagatcgaggtgcagcccaag
tcccaccaccgtgcccactacgagacagagggcagccgcggggcagtcaaagctccgtcc
ggaggtcatccagtcgtacagctctacggttacatggagagcgagccccttaccctgcag
ctgttcatcgggaccgcagacgaccgcctcctgcgaccgcacgccttctaccaggtccac
cgcatcacgggcaagactgtctctaccgccagccacgaggccctgcagtccaacaccaag
gtgctggagatccctctgctgcccgagaacaacatgagagccatcattgactgtgcaggg
attctgaagctgcggaactccgacatcgagctgcgcaagggcgagacggacatcgggcgc
aaaaacacgcgcgtgaggatggtgttccgtgtgcacatcaatcagcccaatggcaggacc
atctccctacaggcctcctccaaccccatcgagtgctcccagcgctcggcccaggagctt
cccctgattgagaagcagagcctggacagctaccccgccacggggggaaagaagatcctc
ctgagtggacacaactttctgccagactccaaggtggtgttcgtggagaaggcccaagat
ggacaccacctatgggagacagaagccaaagttgacaaggactccttcaagtctaccgcg
ctggtggtggagatccccccctacaggaaccagaggatatccagcccagtgcaggtcaac
ttctacgtctgcaatggcaagagaaagaggagccagtaccagcgcttcacctatctctca
ccaaatgtcccgataataaagacagaaccaaatgatgagtatgagcctctgggggctcag
gggctgtctgttcattccaagctctactatggccaacccaggctcactcctatcatacct
gtgggggacgctgacacatgcctggtcggggtttattctccctgcccgccttgccatggc
agcattggcagcatgcccccctcccccaggtccagcccaacactgcacgacctgtccccc
gtgtcttaccccaagtgcctctccaccagccctacgcacgcccacaatggccccttggcg
tccgccatccaagagacaccagggctgcgcccagcgccgctggtctgcccttcctcaccc
gaccaagctccactgggcatgcttcactcccagggcaacagcccgcatcaccttggtaac
cccagtccccatggcttccacccgctctaccacagcagcagcccctccacctccccaggg
tccgacccctccactccagagggggcagcagagagcccgttcgcccaggcaccagattac
agccccacccagggacagagccagactcaggccaggagcagccctcccagcctgctgccg
gtggacgccagcccccgcgacctagccgtcaccgtcaagcgggaaccccaggatctggac
cagatgtacctggacgatgtcaatgagatcatccgaaacgacctgtccagcatctcagtg
catctcagtacataa
DBGET
integrated database retrieval system
