Oncorhynchus keta (chum salmon): 118364061
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Entry
118364061 CDS
T09424
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118364061
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118364061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
118364061
NCBI-ProteinID:
XP_052345616
LinkDB
All DBs
Position
31:14476864..14521418
Genome browser
AA seq
1501 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSTGLINNPHMFLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQWQKSGSVGSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNPGANG
CSGPASRKPPVGPRDTSTPSPFPPSGVMVRRDQVCLSTFYKDCAEMADSDPDCSCQPGER
DGRPPGPRDTVSRKAVDENYNNVSPTSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVSRVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRK
SWDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPVSSTHHSLERTNWNTEEEVESAAKPPGGQEVILGHNGVSEDSSSETSSYSES
SSATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEVVLAQGQLLDSHSIIFWNMVWY
FHRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSG
VPMRNHSWRRHNHPFTLAFLEEVLRWVGMNEIHKGITLFLETIAKQPGTPKIQRSLYREM
LFLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcctgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcaccggactcatcaacaac
ccccacatgttcctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagactaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacactctgggggtcacagacatctccctc
ctgctgcccagtaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagcgttatacctgtgctacaagagagctgtagccaaagcc
aatgccttagtctatgaagcaggtctgatcagtcggtatcctgaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggccccttaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctatgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagtgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgcccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgctagctttgtgaagctgctgcagaacctgggtcct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagcca
ttgtcatggcgatcgctaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgtgcctacctgctgccc
atcacccaggccccttcagacaggactaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtcacgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcatttgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcagatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagatggttcagagtgccccactcactacagctatgagacgttccctgtg
ctctgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagt
gcccccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacggcatatgaggtgctcaagcacatggagaccaggaaggtggtactaccggat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctctaccaatcagggtggccgtcta
cgctgggccaagttgcgtaacgttctaatggccgtggcgcagttcagacagccagtcaga
caatggcagaaaagtggttcagtaggctcgcggacagatacaatggacagtaaccaacga
tcccgcccacaatctaacctgattcgccagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacccaggtgccaatggc
tgcagcggtcccgcctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctagtggtgtcatggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagatggccgactctgaccctgactgcagctgccagcctggggagaga
gatggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactac
aacaatgtgtcaccaacgagtcggggcagcctgacggggaaactgcagcagctgctcacg
cctactcgccatcgagtctcagggcggcgggccgccagtgtagacgcccggcgctcgggg
ggagaaaacgggcctgtgagccgggtgtcggaacagagacagtcccgaaaagcccaggtg
gctgagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctg
tcggtggggagtgacgttgacctccctgacaccaccaatttggcctttcctctccgcaaa
tcctgggacaccaaccaagagggagcgggactacaggtgttgatgtcgagctgctccttg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacctgtcagcagcactcaccatagcctggaacgtaccaac
tggaacacggaggaggaggtggagagtgcagccaagccccctggtggccaggaggtcatc
ctgggtcacaacggtgtgagtgaggactccagctctgagaccagcagttattctgagagc
agcagcgctaccatgggttcatcggtgggcgagtctccccaggtgacggtggcctacctg
agcccattggtgctgcgcaaggagcttgagagcctgctagagaacgagggcgaggtggtg
ctggcacagggccagctcctggacagccactccatcatcttctggaacatggtttggtac
ttccatcgcctgggcctgcccagcaacctgctgcagctggttcgctcctcaccgctggcc
aaccaactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacaca
ctgacccctgacacagaccactggccccccctctacatcctgtggaggatacacagtggc
gtacccatgcggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctg
gaggaagtgctgcgctgggtcggtatgaacgagatacacaagggaatcaccctcttcctg
gaaactattgctaagcaaccgggcacgcccaagatacaaaggagtctgtacagagagatg
ctcttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatac
aaggctgcgtaccaaaggctgagtggctccttggggcgcggggagctccgcaggaagcga
gcccagccacctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgag
tgctga
DBGET
integrated database retrieval system
