Oncorhynchus keta (chum salmon): 118364133
Help
Entry
118364133 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118364133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118364133
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118364133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
CM_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
118364133
NCBI-ProteinID:
XP_052345606
LinkDB
All DBs
Position
31:complement(14170106..14255160)
Genome browser
AA seq
1112 aa
AA seq
DB search
MARSWAPCCHSQRRRRAARPSSSPHLSCRASVPPLPPCVPVPVCASYPKPTSTLQPTHTL
IHTLRHLTHSQNHHHHQPCHRSYSNSNSISQRHYQESSLGSVFGGSTQSVDEELGELWRQ
EDRQRLGEERERWREERRTEGLRGAPPGEERGEKTGRPLGRTFSFLRKMAVQRKNKEKER
MKEREKEAREREARYSNGHLFTSLTVSATTLCSACNKSITAKEALSCPTCNVTIHNRCRD
TLANCVKMKQKQQKLALVRNSSALPNVALRTKTPMMKERPSSAIYPSDSLRQSLLGSRRV
RSGLSLSKSVSTQNLAGNLNDDSPLGLRRILSQSTDSLNFRNRAMSMESLNDEGEVYYAA
MLEELEREGKDFEADSWSRAVDPSYLQTHRKDVIKRQDVIYELIQTEFHHVRTLRIMEGV
FRQGMLDEVLLEPGVAHAVFPCLEQLMALHTRFLSQLMTRRTHSLAPGSGTNFTINQLGD
ILTEQFSGQCADEMRKAYAEFCSRHPKAVKLYKELLARDKRFQHFIRRVSRGPLLRRHGI
QECILLVTQRITKYPVLIQRILDNTKGSEEEAQSLAQSLSLIRDLLSSVDQQVAELERTQ
RLQEIRARLDPRAQAEVRGGGVFRGGELLRRTLLHEGTLLWKTQGSRLKDVQVLLMTDIL
VFMQEKDQKYLFPCIDKPAVLSLKNLIVRDIANQERGMFLISDSTPPEMYELHGASRDDR
NNWMRLIQQTVSSCPSREDFPLIETEDKALLRRLRADIQQKDREVLELLQERVTLFSDLA
EVTGGCQEVTPPTNSRNIFRADTPYAPQAEYLLTDAISEVDRLSELLLGSNIELPKSNGS
TNGTNDDQNHKGAPVSNGDSTSVNGTHEMKGSPASRDRNGNQLQDRPLNEEVCQRLVNLS
AHLQSLQAAVIHQDSVLELRLHEGTGPASSGSPTPTPTPPNSFPRLCRSMSRDTGLDAGM
VAAMGEMAMLQKQHDLLQEEVVRLRPLEARLRESERVRAQLEQQIRDNKGRRGRRGRRGG
RGNNEDIVVDVTALEQAPSKRRGSGDGEPSPVAPLACQEPVDQLDGVQEGSEEESEEEAD
VVKVSPRSDSPRDLQDIPEESECGPEAQESKG
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggccaggagctgggctccctgctgtcactcacagaggaggaggcgggctgccagaccc
agctcttctccccatttgagctgcagggcttcagtgcctccgctccctccctgtgtgcca
gtcccagtctgcgccagctacccaaagccaacctccaccctccaacccacgcacacactc
atacacactctcagacacctcacacactcacaaaaccaccaccatcatcagccttgccat
cgctcctactcaaactccaattccatctcccaacgccactaccaagagtcttccctgggc
tctgtatttgggggttccacacagagtgtggatgaggagcttggtgagctgtggaggcag
gaagacaggcagcggctgggcgaagagagagagaggtggagggaggagagaaggacggag
ggactgaggggtgctccccccggggaggagaggggggagaagacaggaaggcctctggga
cgcaccttcagcttcctgcgcaagatggccgtccagcgcaagaacaaagagaaggagcgg
atgaaggagagggagaaggaggcgcgagagcgggaggcgcgctatagcaacggccacctc
ttcacttccctcaccgtgtctgccaccaccctctgttccgcctgcaacaagagcatcacc
gctaaagaggccctcagctgccccacctgcaatgtcaccatccacaaccgctgtcgagac
acactggccaactgtgtcaagatgaaacaaaagcaacagaagctagccctggtgaggaac
agctctgcgctgccgaacgtagctctgaggaccaaaacccctatgatgaaggagcggccc
agctcagccatctatccgtccgacagtctccgtcagtccctgctgggctctcgccgtgtc
cgctctggcctctccctctccaagagtgtctccacacaaaacctggcagggaatctgaat
gacgactcaccgttggggctgcggaggatcctgtctcagtccacagactccctgaacttc
agaaacagagccatgtcaatggagtccctcaacgacgagggggaggtgtactatgctgcc
atgttggaggagctggagagggaggggaaagactttgaggctgactcgtggagccgggcc
gtagacccctcctacctgcagacgcaccgcaaagacgtcatcaagagacaggacgtcatc
tatgagctgatccagacagagttccaccacgtgaggaccctgcggatcatggagggggtg
ttccggcagggcatgctggacgaggtgctgctggagccgggcgtggcgcacgctgtcttc
ccctgtctggagcagctgatggcgctacacacacgtttcctttcccagcttatgacacga
cgcacacacagtctagcccccggtagcggtactaactttactatcaaccaactgggggat
atactgactgaacagttctcaggtcagtgtgcagatgagatgaggaaagcctatgctgag
ttctgtagccgccaccccaaagctgtgaaactatacaaggaactgctggccagagacaag
aggtttcagcacttcatacggagggtaagccgggggcccctgctgcgtcgccatggcatc
caggagtgcatcctgctggtgactcaacgcatcaccaaataccctgtcctcatccagcgc
atcctggacaacaccaagggcagtgaagaggaggcccagtccttagcccagtccctgtcc
ctgatccgggacttgttgagctctgtggaccagcaggtggcagagctggagcggacccag
aggctccaggagatcagggccagattggacccccgggcccaggcagaggtcaggggagga
ggggtgttcaggggaggggaactgctccgcaggacgctcctccacgagggcacactgctg
tggaagacgcaaggatccagactcaaagatgtgcaggtcctgctgatgacagacatcctg
gtgttcatgcaggagaaggaccagaagtatttattcccctgcatagacaagcctgcagtg
ttgtctctgaagaacctgatcgtgagggacatagccaatcaggagcgagggatgttcctg
atcagtgactccacccccccagagatgtacgagctgcacggcgcctcacgagacgacagg
aacaactggatgagactcatacagcagacagtcagcagctgtccgtctagagaggacttc
cccctgatagagacagaggacaaggccttactgcgccgactcagagctgacatccagcag
aaggacagggaggtgctggagctcctccaggagagagtgactctgttctctgacctggct
gaggtcaccggtgggtgtcaggaggtcacgccccccaccaactctaggaacatcttccgg
gccgacaccccctacgcaccccaggcggaatacctactcaccgacgccatctcagaggtt
gacaggctcagtgagttgctgctgggctccaacatagagcttcccaagtccaatggtagc
accaacggtaccaatgatgaccagaaccacaaaggggcgccagtgagcaatggagattcg
acctccgtcaacgggactcatgaaatgaaaggaagtccagcgtccagggacagaaatggt
aaccagctacaggacagacccctaaatgaggaggtgtgtcagaggcttgtgaacctcagt
gctcatctccaatctctacaggccgccgtcattcaccaagactctgtcctcgagctccgc
ctccatgagggcacaggccctgcctcctcaggttccccgactcccacccccactcctcca
aactccttccccaggctgtgccgttccatgtcacgtgacacaggtctggatgcgggcatg
gtggcagccatgggggaaatggccatgctccagaagcagcatgatctgctgcaggaggag
gtggtgaggctgcgccccctggaggccaggctgagggagagcgagagggtccgggctcag
ctggagcagcagatcagggacaataagggcaggaggggaaggaggggcaggaggggcggc
agaggcaacaacgaagacattgtggtggatgttacagctttagagcaggctccctctaaa
aggagaggaagtggtgacggcgagcccagccctgtcgccccattggcctgtcaggaacca
gtggaccaattggacggcgtacaggaaggcagtgaggaggagtcagaggaagaggcagat
gtagtgaaggtttcaccacgctctgacagtccaagagatctccaggatatcccggaggag
agcgagtgcggaccggaagcgcaggaatccaaaggctga
DBGET
integrated database retrieval system
