KEGG   Oncorhynchus keta (chum salmon): 118364168
Entry
118364168         CDS       T09424                                 
Name
(RefSeq) elongin-B-like isoform X1
  KO
K03873  elongin-B
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118364168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oke04121]
    118364168
   03400 DNA repair and recombination proteins [BR:oke03400]
    118364168
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     118364168
   Cul5 complex
     118364168
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118364168
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 118364168
NCBI-ProteinID: XP_035601325
LinkDB
Position
3:complement(4312135..4335267)
AA seq 194 aa
MSLCFSVQQECIPQAIRCMDILCQCDPVVETPVNQACGRTGVACRTSDSPHEKQCMINAT
LRQGDLLGVMYSLTLGDVFLMIRRQKTTIFTDAKESTTVYELKRIVEGILKREPEEQRLF
KDDQLLEDSKTLGDCGFTNQTARPQAPGTVGLAFRMGDEMFEQLQVGAFSSPPELPDVMK
PQDSGSTANEQTVQ
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtctctttgtttttcagtccaacaggagtgcatccctcaggccatccggtgcatggac
atcctgtgccagtgtgatccggttgtggagactccagtaaatcaagcctgtggccggaca
ggcgtggcatgcagaacgtcagactcaccccacgagaagcagtgcatgatcaacgccacc
cttcggcaaggggatctgctgggagtgatgtactctctcactctgggtgatgttttcctt
atgatccggcgtcagaagaccaccattttcacagacgccaaagagtccaccaccgtctac
gagctgaagcgcattgtagagggaattctcaagagagagcctgaggaacagaggctcttc
aaggatgaccagttgctagaagacagtaaaactcttggcgattgcggcttcaccaaccag
actgcaagacctcaggccccaggcactgttggactggctttccgaatgggtgatgagatg
tttgagcagctgcaggtgggggcattctccagccctccagagctccctgacgtcatgaag
ccccaagactctggcagcactgccaacgaacagactgtgcagtga

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