Oncorhynchus keta (chum salmon): 118364242
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Entry
118364242 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118364242
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118364242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118364242
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118364242
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118364242
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118364242
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118364242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
118364242
NCBI-ProteinID:
XP_035601504
LinkDB
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Position
31:complement(5117271..5128779)
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AA seq
853 aa
AA seq
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MAEVSEVLMSVLSTIRVPRPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
HTRCGQRAYLHISRTRKAPKEDEENSGSGDPPKKKPTRLAIGIEGGFNVEQEQYEEEVKV
VLFPDRQEVASDDLATMPDLVRERVSLAMAGLMSADSVSHALQVQQWDGEVRAESRHAVE
LKQLDNGTKIPPSGWRCEVCDLQENLWMNLSDGRVFCGRRYFDGSGGNNHALLHFQQTGH
PLAVKLGTITPDGADVYSYDEDDMVLDPKLPEHLSHFGIDMMTMEKTEHTMTELEIAVNQ
RVGEWEVIQESGATLRPLSGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNIDKIF
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGEGSEPSSEPRGDQVGIAARMFKALV
GRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGVNPSEAFRFLVEERIVCQQSQKAKYTQ
RVDYILQLPVPMDQATNTEELQEAERRREEADSSGAPPPTPVRACIPFTACMAALSEPET
LTDFWSSAAQAKTTATKTTRFASFPDHMVIQVKKFTFGQDWVPKKLDVSIDVPDTLDLTA
LRGTGQQPGEELLPEVAPPPLMTPDLEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQL
CEMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMDDPDFSAPMVLPGTSSAPGTTPTESVS
EEHLATIVSMGFSRDQATRALRATSNVLERAVDWIFSHLDDLESMEVSEGGRSAAESEGS
REPPPGPKVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPK
DLGYLYFYRRVTE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtaagcgaggttttgatgtcggttctgtccacaattcgggttccgaggccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcttctccggagagtgaagga
ggcttatatgtgtgcatgaacagtttccttgggttcggcagccagtatgtggatagacac
cacaccaggtgcggacagcgggcttacctgcacatctcccggacccgcaaagctccgaag
gaagatgaggagaactctggatccggtgacccacccaagaagaagccaacccgattagcc
ataggtatcgagggagggttcaacgtggagcaggagcagtatgaggaggaagtaaaagtc
gtcctcttccctgatagacaggaagttgcatccgatgacctcgccaccatgccggacctt
gtgagagagcgggtatctctagccatggcagggctgatgtctgcagactcagtgtctcat
gccctgcaggtgcagcagtgggacggcgaggtgcgggcggagtcccggcatgccgtcgaa
ctcaagcagctcgacaacggcaccaagatccctcccagtggttggcggtgtgaggtgtgt
gacctgcaggagaacctgtggatgaacctgtcggacggaagggtgttctgtggtcgcagg
tattttgacggctccggggggaacaaccatgccctcctgcacttccagcagacgggacac
cctctagccgtcaaactgggcaccatcacccccgacggagcagatgtgtactcctatgac
gaggatgatatggtactggatccaaagctccccgaacacctgtcccactttggcatcgac
atgatgaccatggaaaagacggagcatacgatgacagagctggagatagctgtgaaccag
cgtgtgggggagtgggaggtgatccaggagtcaggggccaccctccggcctctgtcaggc
cccggcctcactggcatgaagaacctgggcaacagctgctacctcaactcggtcatgcaa
gtcctcttcaccgtgcctgacttccagagcaagtacgtctccaacattgacaagatcttc
gatgaagctccaagcgaccccacccaggacttcaaaacccaagtagcaaagctgggctat
ggtctgttgtcgggcgagtattccaaaccagcacctgaccccggagagggctctgaaccc
agctctgaacccagaggtgaccaggttggcatagcggcacgcatgttcaaagcacttgtt
gggcggggccacccagagttctccaccaatcggcaacaagatgcccaggagttcttatta
cacttcattaatatggtggagagaaactgtcgttcgggggtgaacccgtctgaagccttc
cgtttcctagtagaggagaggattgtgtgtcagcaatcacagaaagcaaagtacacacag
agggtggactacatcctccagctacctgtgcccatggaccaggccaccaacaccgaggag
ctgcaggaggctgagcgtcggcgcgaggaggcagactcgtcgggagcccctccccccacg
ccagtgcgcgcctgtatcccgttcacagcgtgcatggcggcgctcagcgaaccggagacg
ctcacagacttctggagctccgccgcgcaggccaagaccaccgccaccaagaccacccgc
tttgcctctttccctgaccacatggttatccaggttaagaagttcacttttggacaggac
tgggtccccaagaaactggacgtaagcatcgacgttcccgacacgctggacctgactgcg
ctccgtgggaccggccagcagccgggggaggagcttctgccagaggtggccccaccccct
ctcatgacccctgacttggaggtcaaaggtatcctgggttcccacggcaacgaggaggac
gactctctctactccccactactgtccccagtcctggacgactccaccgtgtcccagttg
tgtgagatgggattcccactggaggcctgcaggaaggctgtgtactatactgggaatact
ggaatcgacgcagccatgaactgggtcatgggccacatggacgacccagatttctccgct
cccatggtgttgccaggcaccagctctgctcccggaaccacacccacagagagcgtttct
gaggagcacctagcaaccatcgtctccatgggcttcagccgagaccaggccacgcgagca
ctgagggccacgagtaatgtcctagagcgtgctgtggactggatcttctcccacttggat
gatctagagtccatggaagtttcggaggggggtcgctcggccgccgagagtgaggggtcc
agggagccccctcctgggcctaaagtcagagacggacctggcaagtatgagctgtttgcc
ttcatcagtcacatgggcacgagcactatgtgcggccactacgtctgccacatcaagaag
gaccaacagtgggttatctttaacgatcagaaagtgtgtgcctcagagaagccgcctaag
gacctgggttacctctacttctaccggagagtcaccgagtga
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