Oncorhynchus keta (chum salmon): 118364248
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Entry
118364248 CDS
T09424
Name
(RefSeq) calsyntenin-3-like isoform X1
KO
K22661
calsyntenin 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118364248
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Cadherin related
118364248
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
118364248
NCBI-ProteinID:
XP_052345317
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Position
31:complement(5195340..5239792)
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AA seq
960 aa
AA seq
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MDRMSFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPTGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPSVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAV
VPDSVAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNHREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGVIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLLDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGTRGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDNANDDQRIIIKKEGRDGNPRRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttttctgtccttcctcctcctttgcttgacttcagttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtatcgtcatggag
aatgacaacaccgttcttctcaacccaccactgttcgccctggataaagatgctccactg
cactatgcaggtgagatctgtggcttccgggtgcacaatgggcccacgggatccagttcg
gtacagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagcccctggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaggctacggtgcatgtacgt
gtgaatgacgtaaacgagttctccccagtgttcgtggagcgtcgctatgaggcctccgtc
ccagaaggccgtctgttcgaccgcatcgtgcgcgtcgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccagtgttccctttgtcatc
gataacgatggtaacattaagaacaccgagccattggattcgaagcgccagcgtgtccac
accttctgggtgacagcgtttgactgtggcaagaaccgtgctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcggttggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgtgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggatttactcccgcccccatccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcgtccctggtgttctccttcaatggctccacccatgttgctgtg
gtacccgactccgttgccgcggccgtatccggagaccatttcaccctccagctgtggatg
cgaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccacagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctccgttcacggctgccgtctctctcttttctactggcccgacgtctcc
gctgcgcggcccgtgaaattcctctggaaactggagcaggtgtgtgacagcgagtggcat
cacctgtccctcagtgtccagttcccctctgtgacactgtatgtggatggagtcaccttc
gaccccgccctcatccacgacaacggagtcatacccaaccctgccccacgacagcgactg
gtcattggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatc
cctgaagggaaagacacagggaagtatgtgggtggttaccgtggcctgttgtcaggggtg
acggtgcgtccagggagtgtggagccccacagtgtggtggagtgtctgtacgcctgcaga
gaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaac
ccaagtcagtctgtgctggttctggagggtgatgacattgagagcttcaacagggccgtg
caacaggtcacctacaggaactctctccgcttcgccacccctggagtcagaccactcaaa
ctgaccacctctctcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagcctgacgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaattcgagggcccccgtggtgtacccctcttcccagag
ctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaagga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctaaacccagagagggaggagctcctgctggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagcggagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccgcctggctaaaggatcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgag
ctcacactggaggtgaacttcctgcactccctggacagtctgtaccacccgtctcacctc
ctggcctcccagcagcagttccttcacccatctcatcactctggggagctgagcggacac
accctgcctaacccccaccgcaactcagtggtgccaggagcggcaacagtcatcatcatg
gtgtgcgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatc
caccgccgtggtgagggcaccaggggagggtctaaggaggacagcggccaatgggatgac
tctgctctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctca
gctgacactgaaggtgagggggaggaggacgaggaagtggtggagtcgcctgacaacgcc
aacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctac
taa
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