KEGG   Oncorhynchus keta (chum salmon): 118364429
Entry
118364429         CDS       T09424                                 
Name
(RefSeq) RNA-binding protein MEX3A
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118364429
   04121 Ubiquitin system [BR:oke04121]
    118364429
Enzymes [BR:oke01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118364429
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118364429
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118364429
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 zf-C3HC4 RING_XB3-XBAT31 Prok-RING_4
Other DBs
NCBI-GeneID: 118364429
NCBI-ProteinID: XP_035601851
LinkDB
Position
31:complement(11590232..11597553)
AA seq 516 aa
MPSLLVLAGIMEKNGGYGGDLAGSGYGSEGLLVPPDEEEDDSRALRVALGQLSLLGLGEG
EDGGGAPGTGVQDRSNNNNNHHNHTNNIGGGIGDTGLLQGKNKLCVLYEGSSSETKGRGC
NITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALAR
REIISAAEHFSMLRASRNKLGVSFSGSPPAPLPGQTTIQVRVPYRVVGLVVGPKGSTIKR
IQQQTCTYIVTPSRDRDPVFEITGSPSNAERAREEIEAHIAFRTGGLHDHNNENDCLGPD
GGSPVGSGGLESRLQQVWGLQGGQRKPLTSSFRQNFSDAMVGGEGGGIIYSKGNFNSPGE
KPCSYFGSEGTQSWGDPDYPKQVAFYAQQRSKSFGGLPLPLTRLSPGLPDPCGGNNGNSS
GTSITILSGSPHAQARRAHSEPTSGAGFPGRLPVPDSPPAILRDCMTCFESKVTAALVPC
GHNLFCMECAIRICELNHPECPVCHTLVSQAIRIFS
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgcctagcctgctggttctagcagggatcatggagaaaaatgggggctacggcggggat
ctcgccggctccgggtacggaagcgaaggtctcctagtgccaccggacgaggaagaagac
gactcccgtgccctgagggtcgcgctgggccagctgtctctactggggcttggtgaaggc
gaggacggtggtggggctcctggaacgggagtacaggatcggagtaacaataacaataac
catcacaaccataccaataatattggcggaggtattggtgacacagggcttttgcaaggg
aagaacaagttatgtgtcctgtacgagggttcttcaagtgagacgaaaggacgaggctgc
aacataacagaatgcgtccccgtgcccagctcagaacatgtggccgaaatagtggggcga
caaggttgcaagatcaaagccttgcgggccaagaccaacacctacatcaagactcccgtg
aggggcgaggagcctgtgtttctcatcacgggccgaaaggaggatgtggccctggcccgg
cgcgagatcatctctgccgccgagcacttctccatgctccgagcttcccgcaacaagctg
ggtgtgtccttcagcggttccccgcctgcgcccctaccgggccagaccaccatccaggtg
agggtgccctaccgtgtggtggggctggtggtggggcccaagggttccaccatcaaacgt
atccaacagcaaacctgcacctacatcgtcacccctagccgagaccgtgaccccgtcttc
gagatcacgggatcacctagcaacgccgagagggcccgtgaggagatcgaggcgcacatc
gcattccgaacgggaggtctgcatgaccacaacaacgagaatgactgcttggggccggat
ggcggcagcccagtaggctccgggggtctggagagccgcctgcagcaggtgtggggtctg
caggggggccagcgcaagccgttgaccagcagcttccgccagaacttctctgatgccatg
gttggaggagaaggaggtggcataatctacagcaagggcaacttcaacagccctggagag
aagccctgttcctactttggctcagagggcacccagagttggggagacccagactaccca
aaacaggtggccttctatgcccagcagcgctccaagagctttggaggcctgcccctgccc
ctgaccagactctctccaggccttcctgacccctgtggagggaacaacggcaactcctcg
ggcactagcatcactattctgtctggctctcctcatgcccaggcccgccgtgcccatagc
gagccaacctcgggcgcggggttccctggacgcctccctgtaccggactcgccaccagcc
atcctccgggactgcatgacctgcttcgagagcaaagtgacggccgccctggtgccctgc
ggccacaacctcttctgcatggagtgtgccatccgcatctgtgagctcaaccatccagag
tgcccggtgtgccacaccctggtctctcaggctatccgaatattctcctaa

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