Oncorhynchus keta (chum salmon): 118364556
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Entry
118364556 CDS
T09424
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118364556 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118364556 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118364556 (vars1)
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
118364556 (vars1)
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118364556 (vars1)
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118364556 (vars1)
Prokaryotic type
118364556 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
DACNG
Motif
Other DBs
NCBI-GeneID:
118364556
NCBI-ProteinID:
XP_052345678
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All DBs
Position
31:complement(16296113..16313565)
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AA seq
1321 aa
AA seq
DB search
MNLSKGPSNQTCAQHCIRLPTTVIRCLSGTQELTSLSSSFNGMASLYVSPHPDDFRSLMA
LVAAEFCPSRLCTLIEDPPASLALCSRPSLVLGSGGGEVLSGASAVAWYLASQGKRIGSN
AKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKSMQLQQSSHAEMMRVLNVLDKN
LEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRRALTNVTRWFLTCVNQPQFVKVLG
QISLCEKMVPVTPKPSIAPVPAANANPTADANATNGKPKTEAQLKKEAKNREKLEKFQKK
KEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPPGEKKDVLSPLPDSYSPQYVEA
AWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDCLTRW
HRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGLSRHDLGRDQFIQEVWKWKNEKGDRI
YHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIYRSKRLVNWSCTLNSAISD
IEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEVIVATTRIETMLGDSAVAV
HPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVKITPAHDHNDYEVGNRHNL
AFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGHFKETKDNPMVVPVCSRSKDI
VEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFNWLDNIRDWCISRQLWWGH
RIPAYFVTVTDPSVTPGEDMDGHYWVSGRTEEEARDKAAKRFNVSTDKITLRQDEDVLDT
WFSSGIFPFSIFGWPNETQDLSVFYPGSLLETGHDILFFWVARMVMMGLKLTGKLPFKEV
YLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQDSNLDPVEVEKAKQGQKSD
YPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCNKLWNAVKFAMRTLGDNFV
PSENAQLCGEESVSDRWILSRLCTAVGLCNAGFQAYDFPAITTAIYNFWLYELCDVYLES
VKPVFSRAEEDSGSQSQAVVCRQTLFTCLETGLLLLAPIMPFVGEELYQRLPRRRSQDGH
PSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADYNLTKTRADCYLQCIDSET
MSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRCTVHLMLKGLIDLEKEVTK
LTVKKGELEKQMDKLREKMEKSDYKEKVPVKVQDLDAEKLRQSQTELEKATEAIDNFKRM
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtccaaaggtccttcgaaccaaacatgtgcgcaacattgcatcagactgccg
actactgtaatacgctgcttatccggaactcaggagttgacgtccctttcttcttcattc
aacgggatggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggcc
ctggtcgctgcagagttctgcccttctcggctctgcacactcatagaagaccctcctgcc
tccctggccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctc
tctggggccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaat
gctaaacaggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcct
gtgtcctgtgctgtggtgttcccactgcttggggtgatgggagtggataagaagtccatg
cagcttcaacagagttctcatgctgagatgatgcgcgtgctaaacgttctagataagaac
ctggaacctagaacattcctggtgggagacagcctcactctggccgacatcgctgtggca
accgcagcactcctgcccttcaaatatgccttggagccgtccaacaggagagccctgacg
aacgtgaccaggtggtttttgacctgtgtcaaccagcctcagtttgtcaaggtcctggga
cagatctctctgtgtgagaagatggtgcccgtgacacccaaacccagcattgctcctgtt
cctgctgctaacgctaatccaactgctgatgccaatgctaccaatggcaaaccaaagaca
gaagctcagctgaagaaggaggctaaaaacagagagaagttggagaagttccaaaagaag
aaggagatggaggagaagaaaaagcaagaaaagaaactggcacccccgacagagaaaaag
gccaaaccagagaagaaggacctgggagtgatctcatacgacgtccccacccctcctgga
gagaaaaaagatgtcctgagccccctgccagactcgtacagtcctcagtacgtggaggca
gcctggtactcctggtgggagaagcagggatacttcaaacctgagtacgggcggaagagt
atcagtgagcctaacccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacg
ggatctcttcacttaggccatgccctaaccaacgccatccaggactgtctgaccagatgg
caccgtatgcgtggcgagacgaccctgtggaacccaggctgtgaccacgcgggcatcgcc
acccaggtggtggtggagaaaaaactgatgagggagaggggcttgagccgtcacgacctg
gggagagaccagttcatccaagaggtctggaagtggaagaacgagaagggagaccgtatc
taccaccagctgaagaagctgggttcctctctggactgggacagagcctgcttcaccatg
gaccctaaactgtcctatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtg
atctacaggagcaagaggctggtcaactggtcatgcaccctcaactctgccatctcggat
atagaggtggataagaaggagctgactggcaggactctgctgcccgtgcctggctacaag
gacaaggtggagtttggagtactggtctccttctcctacaagatagagggatcagatgag
gaggtgattgtggcgaccactcgtatagagaccatgctgggagattctgctgtggccgtc
caccctgccgaccccagataccagcaccttaaagggaagatggtgcttcatcccttctgt
gacaggaagatgcccatcgtgtttgatgagtttgtggacgtcaactttggaacgggtgct
gtgaagatcaccccagcccatgaccataatgattatgaggttggaaacagacacaacctg
gccttcatcaacatcctggatgagaatggcctgctcatcaacgtgccggctccattcctg
ggtatgaaacgtttcgaagcgaggaaggctgtgctgcaggctctgaaggacagaggccat
ttcaaggagaccaaagataaccccatggtggtgcctgtctgcagtcgttctaaggacata
gtggagcccctgttgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggca
gctgactcagtccgggagggaagactcaaaatcatcccagaccaccaccataagacctgg
ttcaactggttggacaacatcagggactggtgtatctctcgtcagctgtggtggggtcac
aggatcccagcctactttgtcaccgtgactgacccttcagtcacaccaggagaggacatg
gatggtcattactgggtgagtgggaggacagaggaggaggccagagataaagctgccaag
cgcttcaacgtctccactgacaagatcaccctccgacaggatgaggatgtcctggataca
tggttctcctctggtattttccccttctccatcttcggctggcccaatgagacccaggac
ctgagtgtgttctatccaggcagcctgctggagactggtcatgacatcctgttcttctgg
gtggcccgcatggtgatgatgggcctcaaactcactggcaagctgcccttcaaagaggtg
tacctccatgcggtggtgagggacgcccacgggaggaagatgagcaaatctctggggaac
gtcatcgaccccctggacgtcatcacaggcatctctctggagggtctgtatgcccagctg
caggacagtaatctggacccagtagaggtagagaaggccaagcagggacagaagtcggac
taccccactggtatcccagagtgtggcacagatgccctccgcttcgccctgtgtgcctac
accagccaaggcagggacattaacatggatgtgaatcgtatccttggttaccgtcacttc
tgtaacaagctgtggaatgctgtgaagtttgccatgaggacgctgggagacaactttgtt
ccttcagagaatgcccagctgtgtggggaggagagcgtgtcagaccggtggattctgtcc
cgtctgtgtactgctgtgggtctgtgtaatgcagggttccaggcctacgacttcccagct
atcaccacagccatctacaacttctggctctacgagctctgtgacgtctatctggagagt
gtgaagccagtgttctccagggcggaggaggacagtgggtctcagagccaggctgtagtc
tgcagacagacgctgttcacctgcctggagaccggcctgctcctcctagctcccatcatg
cccttcgtgggcgaggagctctaccagaggttgccacggcgacgatcccaggatggccac
cctagtatccatgtcacgccctaccctgagactgaggagttctgctggcatagtgaggat
gtggaccgtcagatggagtttgtgatgaccgtggtccggaccatccgttcactcagggcc
gactacaacctgaccaagacacgtgccgattgctacctccagtgtatagacagtgagacg
atgtctctggtggagcagtacagtctgcagatccagaccctgtctctatcccagaccatc
cagcccgtcccagccaccggggctgtcccagagggctgtgctgtggccattgcctccgac
aggtgcaccgtccacctcatgctcaagggtctgatagatttggagaaggaggtgaccaag
ctgactgtgaagaagggagagctggagaaacagatggataaactgagagaaaagatggag
aagagtgactacaaggagaaggtgcctgttaaagtacaggatctggatgctgagaagctg
cgtcagagccagacggagctggagaaagcaacggaagccatagacaacttcaagagaatg
ggttaa
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