Oncorhynchus keta (chum salmon): 118364559
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Entry
118364559 CDS
T09424
Symbol
arhgap23b
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118364559 (arhgap23b)
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Others
Others
118364559 (arhgap23b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118364559 (arhgap23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
118364559
NCBI-ProteinID:
XP_035602094
LinkDB
All DBs
Position
3:complement(5839850..5907335)
Genome browser
AA seq
1623 aa
AA seq
DB search
MNGVTFCLVGIPPRSGNEAKGRNDGALSSNENTRSLSSGEVEGVAWQGPRTVLLQKNSQG
FGFTLRHFIVYPPESSLHNNLKDEENGNGNGKGCQRGRLEPMDTIFVKSVREKSPAHQAG
LCTGDRLVKVNGESVLGKTYSQVIALIQNSENVLELCIMPKDEDVLQLVSAYSQDAYLRG
NEPYTGGAQHIPDPPPLCYPRAKPTSTAPLPPNHQSPLDNWHCRPSPVNQASPLDNRSAA
VNVTQTSGRPRGPGENEEDGGGHFGSSAGQEGDWLPSLGQNRRRSSSAVSALDFHFANHN
AAIASATLPHMPARKGSLPATRAHSDAMCHQALSDWYYSQAEAAERMSPRHRSISQDRLA
ELGLGLALGPGGAGGPGSNSMSSIAHRDHGVSQETLMLHHQAAAASHDSYWLGGWGGVSG
PGSRSCSESLLAAYASYERNYGRSQETLAQAAALVSPHCERAPAWPSQGAKEQDKDLGNH
HTVTATTAATLATAPSVGRQTQQLQVAEPQTQSRRLEEEELVGYKSYSPSFCRKASHLLQ
QAHSFREPTYIGPHLNWAPSAKTSPSDCEGGWIGGGVVVPRPSSTPAVIPSSSEDERVLG
EDRGESRETVSPLPLGQEVVLRQKPPMGRRTPVQALRHPLYALPVDPAEPPVGLLPSPNN
PTAGTPSPVSGGTRMGDSLRRPNGSLQPHHSTPDSLASIPFIDDPISPSADLRARHVPAC
SVVSSSSAPCPLVSSLPCALTPSSTTVSPVTLSSSTSPLVKLRSQDSSSIKSRRSSYLLA
ITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLESLRAAEEARSKRHSTSELGT
ITFSDVRKDGWLHYKQILTEKGKKVGGGMRPWKHVFSVLRSHCLLLYKDKREAVLHGAGA
GPGHGEDEHPPISIRGCLIDIAYSETKRKHTLRLTTQDFCEYLLQAEDRDDMLGWIRVIR
ENSKTDNEELGFSRQALISKKLNDYRKQTTTGNKPDTSPRAHRMMPPFLLAKTDNAFMNR
SSSKDESKGPWGIIMKKAKKTGPKVFGVRLEDCQPAVNNKFVPLIVELCCGLVESMGLEY
TGVYRVPGNNAMVSNLQEQLNRGLEINITEERWQDLNVISSLLKSFFRKLPEPLFTDDKY
NDFIDANRLEDSGNRLKSMKKLIHDLPDHYHHTLKFLVCHLKTVADHADKNKMEPRNLAL
VFGPTLVRTSEDNMTDMVTHMPDRYKIIETLILHHDWFFSDGEVDTDEKAPVDIKRDMQP
VPNIDHLLSNIGRTGLPGSEASDSTTSDSTKDKCTWGSKKDLSARDFLPLSIISAVTRKR
KIRPISRPLSSSTDEDSEHEPIKASHYGVGGGAKEDEEDGVGKGCAPNGTEEVEEKGEEE
CRKRIEAKQQSDRGREKEGEGKKEGSAWAKDKGVASPKRHPNSFLYTHYQPTTTSPSPPV
EPSVSPHSKLPGLARGRSAVPSWLSPSRQPGSIQPYNTQKTQQPQLEQQPLPVQYRKTRG
GRARPQSMNLDMVMGKGEGEGGVGRRGDRVKVVRATTEVQRHCSSSVGVPQGCVVASLKV
QRSSHLASALAPSPVSFSPPLPSSSFSPSWTDQGSLGSTVVKRRSALEPRDKRKAWRRHT
VVV
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttaccttttgcctggttggaattccacctcgctctggaaacgaagctaaa
gggcggaatgatggcgccctgtcatccaatgagaacactcggtcgctgtcgtcgggcgag
gttgagggcgtggcgtggcagggccctcgtacggtgctcctgcagaagaactcccagggc
ttcggcttcacgctgcgccacttcattgtgtacccgccagagtcctccctccacaataac
ctcaaggacgaggagaatggaaacggcaatggaaaaggttgtcaaaggggtcgtctggag
cccatggacaccatctttgtaaagagtgtgagggagaaaagccccgcccaccaagctggc
ctgtgtacaggggacagactggtaaaggtgaatggggaaagtgtattagggaagacctac
tctcaggtgatcgcgttgatccagaacagcgagaatgttctggagctctgcatcatgcca
aaagatgaggatgtgttgcagttggtaagtgcgtactctcaggatgcctacctgagagga
aatgagccatacacgggaggggcgcagcatatccccgaccctcccccactctgctacccc
cgtgccaagcccacttccactgcccctctgccacccaaccaccaaagccccctggacaac
tggcactgccgccccagccctgttaaccaggcatcccccttggacaaccgctctgccgcg
gttaacgtaactcagacctccggcaggcccaggggtccgggagaaaacgaggaggatggc
ggaggccattttggctcctcggcaggacaagagggagattggctgccatctttggggcag
aaccgcaggcgctcgtcgtcggccgtcagcgcactggatttccactttgccaaccacaac
gccgccatcgcctctgcaaccctgccccacatgcccgcccggaagggaagtttaccggct
acgcgtgcccacagcgacgccatgtgccaccaggcgctgtcggactggtactacagccag
gcagaggcggccgagcgcatgtcccctcgacaccggagcatatcccaggatcggttagcc
gagctggggttgggcttagcgctggggcctggtggcgctggaggtcctgggtctaactct
atgtcctccatcgctcacagagaccacggcgtttcccaagaaactctgatgctccaccac
caggcagcagccgcctcccacgattcctattggctgggaggctgggggggagtgtccgga
ccagggagccgttcgtgctccgaaagcctgctggcggcgtacgcatcgtacgaacgcaac
tacgggcgctcacaggagacgctagcccaggcggctgcgctggtgtcgccgcactgcgag
agagcccccgcctggccgtcgcagggtgccaaggagcaggacaaggacttgggaaaccac
cacacggttacagccacaactgcagccacactggccacagccccctccgttggtcggcag
acccagcagctgcaggtggctgagccccagacccagagcaggaggttggaggaagaggag
ctggtgggttacaagagctacagcccctccttctgccgcaaggccagccacctcctccaa
caagcccactccttcagagaacccacctacatcggaccccacctcaactgggcacccagt
gccaaaaccagcccctcagactgcgagggaggctggataggagggggggtggtagttcct
cgtccttcctccaccccggccgtcatcccttcttcgtcggaggatgagagagtgctgggg
gaggataggggggagtcgagggagacggtgtctcctctccctctgggccaggaggtggtg
ctgaggcagaagccccctatggggcgtcggacccccgtgcaggccctccgtcaccccctc
tacgccctcccagtggatccggccgagccccctgtcgggctgctgccctccccaaacaac
cccactgcagggacaccctcgcccgtctctgggggtaccagaatgggggacagtctaagg
aggcccaacggtagcctgcaaccccaccacagcacacccgactccctggcctccattccc
tttatagatgaccccatcagccctagcgctgacctacgtgcccgccacgtgcccgcctgc
tccgtggtgtcctcctccagtgccccgtgccctcttgtgtcctctttgccctgtgccctc
acccctagttccactactgtctcccctgtcaccctctcctcctctacctcccccctcgtc
aaactccgctcccaggacagcagcagtatcaaaagccgccgttcctcctacctgctggcc
attaccacggagcgctccaagtcatgtgacgagggcctcaacaccttccgggaggaaggc
cgtgtcttctcgagactaccaaaaagggtcaagagctttttcactgatgggtctctggag
agtctacgtgctgcagaggaggcgcggtcgaaacgtcactccacctccgagctggggacc
atcaccttcagtgacgtacgcaaggacggctggcttcactacaaacagatcctcacggag
aagggaaaaaaggtgggcggcggcatgcgtccatggaagcacgtcttctccgtgctgcgc
tcccactgccttttgctctacaaagacaagcgggaggcggtcctccacggggcgggggcg
ggacctggccacggggaggacgagcaccctccaatcagcatccgcggctgcctgattgac
attgcctatagcgaaaccaagcgtaagcacactctgaggctgaccactcaggacttctgt
gagtacctgttgcaggcggaggacagggatgacatgctgggctggatccgggtcatcaga
gagaacagcaagacagacaacgaggagctgggtttttccagacaagcgctcatcagcaag
aagctcaatgactacaggaaacaaactacaacaggcaataagccagacacctctcccagg
gcccatcgcatgatgccccccttcctcctggccaagacagacaacgctttcatgaaccgc
tcctccagcaaggatgagagcaagggtccatggggtatcatcatgaagaaagcaaagaag
acaggccccaaggtgtttggtgtgcgacttgaggactgtcaacctgctgttaacaacaag
tttgtccctctgattgtggagctgtgctgtgggctggtggagagcatgggtctggagtac
actggcgtctacagggtgccgggcaacaatgccatggtgtccaacctgcaggagcagctc
aacaggggcctggagatcaacattactgaggagaggtggcaggacctgaatgtgatcagc
agtctcctcaagtccttctttaggaaactcccagaacccctgttcactgatgacaagtat
aatgactttattgatgccaaccggctagaggactcagggaacaggctgaagagcatgaag
aaactgatccatgatcttccagaccactatcaccacactctaaagttcctggtctgtcat
ctgaagacagtggcggatcacgccgacaagaacaagatggagcccaggaacctggctcta
gtgtttggtcccactctggtgcgtacctcagaggacaacatgaccgacatggtcacccac
atgcccgaccgctacaagatcatcgagacgctcatcctgcatcacgactggttcttcagt
gatggagaggtggatacggatgaaaaggcacctgtggatattaagagggatatgcaaccg
gtccccaacatcgatcacctgctctccaacatcgggagaacagggctgcctggaagtgag
gcttcagattccaccaccagcgactcaactaaggataagtgcacatggggttccaagaag
gacctgagtgccagggacttcctcccgttgtcaatcatctccgcagtcacccggaaacgc
aagatacgccccatctcccgccccctgagcagcagcaccgacgaagactccgaacatgag
ccaatcaaagccagccactacggggtagggggaggagccaaggaagatgaggaggatggg
gttggaaaaggatgcgcccctaatggaactgaggaagtggaggaaaagggagaagaggag
tgtaggaagaggatagaggcaaaacagcagtctgacagaggaagagagaaggagggagaa
gggaagaaagaagggagtgcatgggcaaaagataaaggggtggcatcccccaaacgtcat
cctaacagcttcctctacacacactaccaacccaccaccaccagccctagccccccagta
gagccctcagtctccccacattcgaagctccccggcctggcccgaggacgctccgctgtc
ccctcctggctctccccctccagacagcccggctctatccaaccttataacacccagaaa
acacaacagccccagttggaacagcagccactgccagtgcaatataggaagacaagggga
ggaagggcaaggccccagtcaatgaatttggatatggtgatgggtaagggggagggcgag
gggggagttgggagacggggagatagggtgaaggtggtaagagccacaacagaagtgcaa
cgtcactgcagcagttcagttggtgttcctcaggggtgtgttgtcgcatccctcaaagtt
caaaggagttcacacctagcctctgctctagccccatctccagtctctttctctccccct
ctcccttcctcctccttttccccttcatggacagatcagggctcccttggttctactgtt
gtcaagcggaggtcggccctggagcctcgagacaagcggaaagcctggcgccgccacacg
gttgtggtctaa
DBGET
integrated database retrieval system
