Oncorhynchus keta (chum salmon): 118364565
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Entry
118364565 CDS
T09424
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118364565
04121 Ubiquitin system [BR:
oke04121
]
118364565
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
90S particles
Other 90S particles
118364565
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118364565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
eIF2A
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
118364565
NCBI-ProteinID:
XP_035602104
LinkDB
All DBs
Position
31:16517027..16530553
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLNPFEVPREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLSTMLSGSCDGELKVWNLTKRECVRTLQAHEGFVRGMVVRFC
GTSFFTVGDDKTIKQWKMETPGYGEEEEPLNTILGKSVFTSIDHHQKEGVFVTCGQQVDI
WDEQRSSPIRSFSWGVDSFSCVRFNPVETELLASCASDRSIVLYDMREATPLKKVIMNMR
SNTLCWNPMEAYNFTCSNEDYNLYTYDMRYLDKPFTVHMDHVSAVLDVDYSPTGKEFVSA
SFDKTIRIFPKDSGHSREVYHTKRMQHVISIKWSSDNKYILSASDEMNIRLWKANAAEKL
GLLAPREKAAVNYSQKLKEKFQHHPQIRRISRHRHLPKSIYSQSKELRVMKEARRRKERN
VRKHSKPGSMPVVTEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctctccaggaatccggacgactatgtccgtgagacgaagttggat
atccagcgtgtaccacgaaattacgacccgtccctcaatccgttcgaggtgccaagagaa
tacacccgtgcactgaatgccaccaagttggagcgcgtgttcgccaagccgttcctggct
tctctggacggccacagggatggggtgaactgcatggccaagcaccccaagagcctctcc
acaatgctgtccggctcctgcgatggagagctgaaggtgtggaatctaaccaaacgtgag
tgtgttcgtacactccaggcccatgaaggctttgtcagggggatggtcgtacgcttctgt
ggcacctccttctttacggttggtgatgacaagactatcaaacagtggaagatggagact
cctggttacggagaggaagaggaacctctcaatactattcttgggaagtctgtgttcacc
agcatcgaccaccaccagaaggagggtgtgtttgtgacgtgtggccagcaggttgacatc
tgggatgagcagcgcagcagccccatccgctccttctcctggggcgtggacagtttcagc
tgcgtccgcttcaaccctgtagagactgaacttctagcaagttgtgcctctgacagaagt
attgtgctgtatgacatgagggaagctacacctcttaaaaaggtaatcatgaatatgagg
agcaacactttgtgctggaatcccatggaagcttataactttacctgctctaatgaagat
tacaatctgtatacatatgatatgaggtacctggacaagcctttcaccgtccacatggac
catgtctcagccgtgctggatgtagactactctccaactggtaaggagtttgtctcggcc
agctttgacaagaccatccgcatcttccccaaagacagtggccacagcagggaggtatac
cacaccaagcgcatgcagcacgtcatctccataaagtggtcgtcagacaacaagtacatc
ctgagtgcttcagatgagatgaacatcagactgtggaaggccaatgctgctgagaagttg
ggattgctggctcctagggagaaggcagctgtgaactacagccagaagctgaaggagaag
ttccagcaccaccctcagatccgccgcatctcgcgccaccgccacctgcccaagtccatc
tacagccagagcaaggagctgcgtgtcatgaaggaggctcgccgcaggaaggagaggaac
gtacgcaagcacagcaagcctggctccatgcccgtggtgacggagaaagagaaacatgtg
gtcaccgtggtgaaatag
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