Oncorhynchus keta (chum salmon): 118364587
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Entry
118364587 CDS
T09424
Name
(RefSeq) ras-related protein Rab-5C isoform X1
KO
K07889
Ras-related protein Rab-5C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04144
Endocytosis
oke04145
Phagosome
oke04148
Efferocytosis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118364587
04145 Phagosome
118364587
04137 Mitophagy - animal
118364587
04148 Efferocytosis
118364587
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118364587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118364587
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118364587
04031 GTP-binding proteins [BR:
oke04031
]
118364587
Membrane trafficking [BR:
oke04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
118364587
Endosome - Lysosome transport
118364587
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118364587
Exosomal proteins of other body fluids (saliva and urine)
118364587
Exosomal proteins of colorectal cancer cells
118364587
Exosomal proteins of bladder cancer cells
118364587
GTP-binding proteins [BR:
oke04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
118364587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Septin
MCR_beta
Motif
Other DBs
NCBI-GeneID:
118364587
NCBI-ProteinID:
XP_035602153
LinkDB
All DBs
Position
3:complement(7192855..7203575)
Genome browser
AA seq
261 aa
AA seq
DB search
MFSYTTRKYRISFATLISETNIKNSQLKIKGKYFDWNLNRSMAGRGGPARPNGPAAGNKI
CQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG
QERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNKADVA
NKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEAQGAAGAGGRARA
GVDLQEPAPQGRSGQCCGGST
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttacacaacgcggaaatacaggatatcattcgccacactgataagtgaaaca
aacatcaaaaacagtcaattgaaaattaagggcaaatacttcgactggaatctaaatcgc
tccatggcgggtcgtggaggaccggcgcgacccaacggcccggcagcaggcaacaagatc
tgccagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagcctggtgctg
cgcttcgtcaagggccagtttcaggagtaccaagagagcaccatcggagctgccttcctc
acacagactgtctgcctggacgacacgacagtcaagtttgagatttgggacacggcaggc
caggagcgataccacagcctggcgcccatgtactacagaggagcccaggcggcaattgtg
gtctacgacatcaccaacagagacacttttacgcgggcaaagaactgggtgaaggagctg
cagagacaagccagccccaacatcgtcatcgctctggctgggaacaaggccgacgtcgct
aacaagagagccgttgatctccaggaagcacaggcctatgccgatgacaacagtctactg
ttcatggagacttcagctaagactgctatgaatgtcaacgaaatcttcatggccatagca
aagaagctgcccaagaacgaggctcagggcgcagccggggcagggggccgggcccgggca
ggagtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagc
acttag
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integrated database retrieval system
