Oncorhynchus keta (chum salmon): 118364588
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Entry
118364588 CDS
T09424
Name
(RefSeq) Wilms tumor protein 1-interacting protein-like isoform X1
KO
K16682
LIM domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118364588
03036 Chromosome and associated proteins [BR:
oke03036
]
118364588
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118364588
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
118364588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
118364588
NCBI-ProteinID:
XP_052345821
LinkDB
All DBs
Position
31:18171815..18206536
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AA seq
662 aa
AA seq
DB search
MDKYDDLDLEASKFLEDLNMYEASRDGLFRMKRDAGNNSDFEETRRVFASKMTKIHIQKQ
QEEIAKNNLAVRMNGGHNRAADSTFYTKDRPPINSYRQAGEAAAKPPILSGPMPGTASAA
SQYAPYDALKRHSPSQQPYSYGNNYDNKDRFEPHSYHHALSPTSPGNAPTHVSGHPASSS
VTWASYSSSPGGSSGLMCSPPQQHPHHSPCPSFSDSLPSPSPTRLHQSKAAPLLVRQRPP
MVAGAAADWMPSLGNPELIAPLPLSAFTAGADLYQHLSPQPAPVTPPTGPYSAAPCMAPR
PNANQGNLRQNGLSQSPVALTPSPTPAQGAVPTPPVHPSETAHPKATTGAYFPASASPSG
TSVSRSFGQGQGIGQARGRQVAMGVDVPSGLDSQLSSGGEACQLQHQPQSLKLPCQTLHV
QPEQGPSAAEIKLEALTKRLEKEMDAQPKADYFGSCVKCNKAVYGATAACQAMGSLYHDV
CFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMDMILQALGKSY
HPGCFRCVICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCAACDQPILPSEGSDETIRV
VSMDKDYHVECYHCEDCQMELNDEEGHRCYPLDGHLLCHACHLKHIEPGCASPTAASYQH
QF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttggatcttgaggcaagtaaatttttagaagacctcaatatg
tatgaggcatctagggacgggttgttccgaatgaagagggatgcagggaacaactccgac
tttgaagaaaccaggagggtttttgcctccaaaatgacaaaaatccacatacagaaacag
caagaggaaatagccaaaaacaatttggcagtgagaatgaacgggggtcacaacagagcg
gcagacagcacgttttacaccaaagacaggccgcctatcaatagctacagacaggcagga
gaagctgcggccaagcctcccatactctctggccctatgccaggcaccgccagtgcggcg
agtcagtacgcgccctatgacgctctgaaacgccattcacccagtcaacagccatacagc
tacggaaacaattacgataacaaggaccgttttgagccgcattcttaccaccacgccttg
agtcccaccagcccagggaatgcacccacacatgtttctggtcaccctgccagttcctct
gtcacttgggcctcttactcttccagccctggtggatcatcagggcttatgtgcagccca
cctcagcagcacccacaccactcaccatgtccctccttctccgacagcctaccatctccg
agccccactagactgcaccagagcaaggctgcccctctactagtgcgacagagacccccc
atggtggctggggctgcagcagactggatgccgagcttggggaacccagagctgattgca
ccgctccctctgagtgccttcactgccggagctgacctgtaccagcatctgtctccacaa
cctgcccctgttacacccccaacaggcccttactcagcagcaccctgcatggccccaaga
ccaaacgccaaccagggaaatctacgccagaacgggctctctcagagtcctgtggctctc
acccccagccccacccctgctcaaggggctgtcccaaccccacctgtacacccatctgag
acagcccatcccaaagccactactggagcttacttccctgcctctgcctctccctctgga
accagtgtctctagaagctttggccagggtcaaggtataggccaggcacggggcaggcaa
gtggccatgggggtggatgtgccctctggcctagacagccagctgtcctctggtggtgag
gcttgccagctccaacaccagccccagtctctcaaactgccctgccagactctccatgtc
cagccggagcaggggccgtctgccgccgagatcaaattagaagccctgaccaagcgtctg
gagaaggagatggacgcccagccaaaggcagactacttcgggagctgtgtgaagtgtaac
aaggcggtgtacggagccactgcggcctgccaggctatgggaagcctctatcatgatgtc
tgcttcacctgcagcgcctgcagcagaaggctacgggggaaagcattttactacgtcggt
gggaaggtgttctgtgaagaggacttcctgtattctggattccagcagtctgcagacaag
tgtaacgcgtgcggacatctgatcatggatatgatcctgcaggcccttgggaagtcctac
caccctggctgtttccgttgtgtcatctgtaacgacagtctggacggagtgcccttcact
gtggacacagagaacaagatttactgtgtcaaagactaccacagggtcttggcccccaaa
tgtgcagcatgtgaccagcccattctgccttcagagggctctgatgaaaccatccgagtg
gtatccatggataaagactaccacgtggagtgctatcactgtgaagactgtcagatggag
ctgaacgacgaggaggggcaccgctgctacccgctggacggtcacctcctctgccacgcc
tgccacctgaagcacatcgagccgggctgcgcctcgcccaccgctgcctcctaccagcac
cagttctag
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