Oncorhynchus keta (chum salmon): 118364593
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Entry
118364593 CDS
T09424
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04621
NOD-like receptor signaling pathway
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118364593
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118364593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
118364593
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118364593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
LRR_6
NOD2_WH
AAA_16
NPHP3_N
AAA_22
AAA_18
ATPase
AAA_30
NTPase_1
AAA_29
RNA_helicase
Sigma54_CBD
Motif
Other DBs
NCBI-GeneID:
118364593
NCBI-ProteinID:
XP_052345829
LinkDB
All DBs
Position
31:18299384..18305586
Genome browser
AA seq
954 aa
AA seq
DB search
MYIMDSSAEEARAGLTGHVSTVQMLTLHRELLVSQVKSTQCIMDNLLQSGFLCIEDAEII
QRAATKTDQVRKILELVQRKGVQACEYFLYILYKVYDAYIDLQPWLKEINYQPPDFIRDI
PVKNTDPISRYCEKLRHELGRDTRFIASYAQREETLLEELYTDTLMELLNDRNESLGHLE
GLEQLLGEQGVFNPQAETVLITGDAGVGKSILLQKLQRLWSKRELEQTDAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFNYILRFPEKVLFTFDGYDEIEADLDLVN
VPEVVSPEERTHPLQVLINLLCGKLLNGSRKVLTARTGTDVQSRVIRKRVALRGFSPAHL
QTYTNLHFKEQEHRDLVSVQLDASPHLCGLCSIPLFCWIVFKSFKHLRSVYDDFELPEAC
VTLTNIFLLLSEVFFSRGATPPPVLLKRNTRCPADTFRAGLRPLTAFSKLALLGMERGGF
VFDKEEVASCGLTDDDLKVGFLRPVSCYDACENPSTFEFLHLTLQSFLAAFSLVLDEQAS
VGNILKFFTECSRRGNTSCLSCVVHCIGGSSKPRGKDLFKTNEHLQYANLFLCGLLSKAN
ANLLEHMFPAALLKRKRAVLKSYLSTSVRSHLRGLPLYSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSVEVLAEELIKHRVVEVLGLYNNHITDIGAKLIAHI
IEECPKLRVVKLGSNKFTSMGGKYLASAIQKSTSIFDVGMWGNSIGDEGARAFAEALRNH
PSLTNLSLSANGITSEGGRSLAEALKGNTMLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLWLINNQLTVGGIRQLSEALSHNTSLKEISLKGNCLSEEEEKLFEAEGRLRFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtatattatggactccagtgccgaggaagcccgtgctggactaacaggccatgtgtcc
actgtccaaatgctcaccttgcaccgtgagctactggtttcccaggtgaagagcacacag
tgcataatggataacctcctacaaagtggttttctgtgtatcgaggatgcagaaatcatc
cagcgcgcagccaccaagacagaccaggtgcgtaaaatcctggaattggtccaaaggaaa
ggggtgcaggcatgtgaatacttcctatatattctctacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactaccagccaccagacttcatacgggacata
ccagtgaagaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgggc
cgagacacacgcttcattgcctcctacgcccagcgagaggaaaccctgttggaggagctc
tatacagacaccctgatggagctcctgaatgaccgcaatgagagcctgggccacctggag
ggtctggagcagctcctgggagagcagggtgtgtttaacccacaggcagagacggtgctc
atcacgggggatgctggggtgggcaagtccatcctcctccagaagctccagaggctgtgg
tccaagagggagctggaacagacagacgccatgttcttcttcaagttccgctgtaggatg
ttcagcactttcaaggagacagacgagatctcactgagggacctgcttttcaaatacaac
tgctaccccgaccaggatgcggataatgaggtgttcaactacatcctccgcttccctgaa
aaggttctctttacgtttgacggctatgatgagatcgaggctgatctggacctggtgaat
gtgcctgaggtggtttctccagaggagaggactcacccccttcaggtgctcattaatctg
ctctgtgggaagctgctcaatggttcccggaaggtcctgacggctcggacaggcaccgac
gtccagagcagggtgatccggaagagggtggcgctgcgtgggttctctccggcccacctt
caaacctacaccaacctacacttcaaagagcaggagcaccgggacctggtctcagtccag
ctggatgccagcccccacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcgctcagtctatgacgactttgagttgccagaggcttgc
gtgaccctcactaacatattcctcctgctgtctgaagtcttcttcagccggggggccact
cccccacctgtcctcctgaagagaaacaccaggtgccccgctgataccttcagggcagga
ctgaggccactgactgccttctccaagctggctctgctgggcatggagagaggaggcttt
gtgttcgacaaggaggaggtggcctcctgtggcctgactgacgatgaccttaaggtgggt
ttcctccgaccggtcagctgctacgatgcatgtgaaaacccttccacctttgagttcctt
cacctcaccctgcagtccttcttggctgcattctccctggttctggatgaacaggccagc
gtaggcaacatcctcaagttcttcaccgagtgcagcaggaggggcaatacttcttgttta
tcgtgtgtcgtccactgcatcggtggctcctccaaacccaggggaaaggacctgttcaag
accaacgagcatctccagtacgccaacctcttcctgtgtggactgctgtctaaggccaac
gccaacttgctggagcacatgtttcctgcagcactactgaagagaaagcgggcggtcctc
aagtcctacctgtccacgagcgtgaggtcccacctccgcggtttgccactctacagcaca
gagcaggagggcagcaaggtgcatgtcctgcccaacttcctgtggatgctgcgctgcatc
ttcgagacaggaagtaaagaggtggcacagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgcccttaactttgtgctg
cagcaccggcggaagagactaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaagatgaccgtggtgagattgtgtgtcaatcag
atctcagacagcagcgttgaggtactggctgaggagcttatcaaacacagagtggtggag
gttctgggactttacaataatcacattacggacatcggagccaagctaatcgctcatatc
attgaggaatgtcctaagttaagagtcgtcaagcttggcagcaacaagttcaccagtatg
ggtggcaagtatcttgccagcgccattcagaagagcacatctatctttgacgtgggaatg
tgggggaacagcattggtgatgaaggagcaagagcatttgcagaggccctgaggaatcac
ccaagtcttaccaacctcagcctctcagccaatggcatcacttcagaaggtgggaggagc
ttggccgaagcactgaaaggcaacacaatgctcagaatcttctggttggtgcaaaatgag
ttgtcagatgatgtagcaccagacatggcagagctgatcagatccaacacgggtctatct
cacctctggttaatcaataatcagctgacagtgggtggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatcagtttgaaaggaaactgtctttctgaagag
gaagagaagctgtttgaggcggagggaaggctacgcttccactga
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integrated database retrieval system
