KEGG   Oncorhynchus keta (chum salmon): 118364631
Entry
118364631         CDS       T09424                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118364631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118364631
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118364631
 Complex B
    118364631
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 AAA_8
Other DBs
NCBI-GeneID: 118364631
NCBI-ProteinID: XP_035602231
LinkDB
Position
31:26615277..26626796
AA seq 501 aa
MSDFDEFERQLSENKQAQLVEHGACNARIGRSIPGNTPEKDKENRHHRRSPSRSRSRERK
RRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPP
GFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP
FGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI
IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKE
LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLL
VQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEE
YEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKF
ANRVVVTKYCDPDAYHRRDFW
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtcggatttcgacgaattcgagagacaactgtctgaaaacaaacaagctcagttggta
gagcatggcgcttgcaacgccaggatagggcgctcgattcccgggaacaccccggagaag
gacaaggagaaccgccaccaccgtcgctccccctctcgcagccgcagccgagagaggaag
aggaggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgc
agaccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttcc
ccgcaccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcct
ggatttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatccca
gccacggccctgctgcccaccatgaccccagacggcctggccgtgacccccactcccgtc
cctgtggtgggaagccagatgaccagacaggcccgtcggctttatgtgggcaacatcccc
ttcggcatcacagaggagtccatgatggatttcttcaatgcccagatgcgtctgggtggt
ctcactcaggctccggggaaccccgtccttgctgttcagatcaaccaggacaagaacttt
gccttcctcgagttccgctcagtggatgagacaacccaggccatggcgttcgatggcatc
atcttccagggacagagtctgaagatccgccgtccccatgactaccagcctctgcccggc
atgagcgagaaccccagcgtctacgtgcctggcgtggtgtccacagtggtgcctgactcg
gcccacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggag
ctcctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggt
ttgtctaagggttatgcgttctgtgagtatgtagacgtcaacctgaacgaccagatcacc
atggagaatcaggccatagcaggactcaacggcatgcagctgggggataaaaagctcctg
gtgcagagagccagcgtgggatccaagaatgccactctgacaagtataaatcagacaccg
gtgacgctgcaggtgccgggcctgatgaacagctcaatgacccagatggccggcctgccc
acagaggtgctgtgtctgatgaatatggtggctgtggaggagctggtggatgaagaggaa
tatgaggagatcgtggaggatgtgagggacgagtgcagcaagtacggccaggtcaagagc
atcgagatccccagacctgtggatgggctggaagtccctggcactggcaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagttt
gctaaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttc
tggtag

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