Oncorhynchus keta (chum salmon): 118364664
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Entry
118364664 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118364664
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118364664
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118364664
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118364664
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118364664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
118364664
NCBI-ProteinID:
XP_052346237
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All DBs
Position
32:29314347..29413253
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AA seq
1222 aa
AA seq
DB search
MDKHCRVKDEATSKAATRKENKQKHGRLFRKKSLKSVGSFVNKIIKTLGTFTHFGDVAVQ
GAEDDDGGFRDGTPCTLSANSENIKEDVQVAGEDSVKNNSIASSRCSVKERVLWCYGGNI
PGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEWYKLDLSRRRINGIVKSEDTQHARG
EVTEQLASLVRALWTLEYIPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDRVHEDV
NLSSCSNNNNKTKAPGKGPGISEAAMVTEPPHSQQPGARHSFVQEHFQAQYKSSLTCPHC
HKQSNTFDPFLCISLPIPLRHTRPLCVTLVFSTKGQRYLRIGLAVPLFGSLAFLRRMLAD
EGKISPDQVILTEIYTTGFQRSFFDEEDLTCIAETDIIYAFQAPPLYIRGGSSQFSGYHH
SLPSSPYSSGPEGQRLPPSGTLSTEFLNHGVPVKILLLVCNAAWNAQQAVRFGPPFLMRE
DRSISWDQLQQSILSKLYYLMINGAQAQNARVLFKIRVVAGSASYSYLSPQDGRPLYHPA
VNRALNLCGSGGPPHVKLIIEWEHRIKDCLFGNIQEEVVKDAESVRGQHQQHVQQHNCTL
DECFQLYTKEEQVHYLLLRSALNNQQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKL
ATLVRFPLDGLDMAPHVVKRSQSTRLPPHGPLLPGPLHPAWKQPCPPDMAPPDFLYDLYA
VCNHHGGMHGGHYTAFCRNSLDAQWYGYDDSSAEPVTEGEVCTRGAYILFYQRRNTIPPW
SASSSLRGSTSSSTSDHWLIRLTRDSKRGSLFSEGSTSGPPGPTPTPESPELPVFEDEPL
KTETDGFENKLFVRGTQGRSVSMRSPTKDTLSKVLPLRWSFGSKDRPKPSAPRRGELVEY
LESGRRPRCTKDPIITLVATPPQGGHRDLGSSPSGSSLSCMDRSNSEACDSPRVPEGQSR
PAVERSSSLGLSIITKVRDDSSLGRRSSKRFRQDQGRTLDPHPHRGSTDGVHISHSAPPS
RDSTLKRPKAQAGLTSRVGVLQAGLQPEERKGMRGQEVRSHDSLLSFFKSGFLKKDAQST
PSKGEEVRVNGHGRTSKVANCSLSKLSLSNGTLNGVALEEKRANGAPRSDCRHSKGQLVN
GRAGSHSSAADIKRAHSSSNIQTKLDLTLRRCSSLQKNGQVAPPAPRSSLATDKPSYATL
QRARYSTTSLGRQQRPVPESCF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggataaacactgcagagtgaaggatgaagccacgtcaaaggcagcaacgcgcaaggaa
aacaaacagaaacatggacggctttttcgaaagaaatcattgaagtcggtggggagtttt
gtaaataaaattatcaaaactttgggcacttttacccactttggagacgttgcagttcag
ggcgcagaggatgacgatggggggtttcgtgacgggacaccttgcacactcagtgccaac
tcagaaaatatcaaggaggatgtccaggtcgccggggaggattctgttaaaaataattcg
atagcttcttcccgttgctcggtgaaagaaagggttttatggtgctatggtggcaacatt
ccaggtgttctaggcttgaaaaatcacgggaacacctgtttcatgaacgccgtggtccag
tgcttgagcaacactgacctgctcgcagagtatctcgggttggaatggtacaaattggat
ttgagtcgaaggagaattaatgggattgttaaaagtgaagacacgcagcatgccagaggt
gaagtcacggagcagttggcatcacttgttagggcactttggactctggaatacatcccg
caactgtccgtggaattcaagagtatagtatccaagtatggatcccaattccgaggaaac
tcccaacatgacgccctggagttcctgctttggcttctggaccgagttcacgaagatgtc
aacttgtcctcctgcagcaacaacaataacaagaccaaagccccagggaagggccctggt
atatcagaggcggcgatggtcactgagcctccccactcgcagcagcccggggcacgccac
agctttgtacaggaacacttccaggcacaatacaagtcatcgctgacctgccctcattgt
cataaacagagcaacacctttgaccctttcctctgcatttcacttcccatccctcttcgc
cacaccaggcctctgtgtgtaactctggtctttagtacgaagggccagagatacctgcgc
atcgggctggctgtgcctctctttggctcgctggcctttctgagaaggatgttggcagat
gaggggaagatctccccagaccaggtgatcctgacagagatctacaccacaggctttcag
cgctccttctttgatgaggaggatctgacgtgcatagccgagactgacatcatctatgcc
ttccaggccccgcccctatacatcagaggaggctcttcacaattctcagggtaccaccac
agcctgccgtcctcaccatactcctccgggcccgaaggtcaaaggttacctccatccgga
actttgtcaacagagttcctgaaccatggtgtgccagtgaagatcctgttgctggtgtgc
aatgccgcctggaatgcccagcaggctgtcaggtttggacctccgttcctgatgagggag
gaccgctccatctcctgggaccagctgcagcagagcatcctcagcaagctctactacctg
atgatcaacggagcacaggcccagaatgcaagagtgctgtttaagatccgtgtggtggca
ggatcagcgtcctacagctacctctccccccaggatggacggccgctctaccacccagca
gtgaacagagctcttaatctctgtggctcaggaggaccgccccatgtgaagctcatcatc
gagtgggaacacagaatcaaagactgcctgtttgggaacatacaggaggaggtggtgaag
gatgctgagagtgtgagaggccagcatcagcagcacgtccagcagcacaattgtaccctg
gacgagtgctttcagctctacactaaagaggaacaggtacattatctcctcctacggtca
gccctaaacaaccaacagctgcaacaaggcatggtgaagatgagcctgtggacgctgcct
gacatcctcatcctccacctgaagcgcttccggcaggtgggcgagcgccgcaacaagctg
gccacactggtgcgcttccccctagacggcctagacatggcgccccatgtggtgaagagg
agtcagagcacccggctgcccccccacggtcctctgctccctggccccctgcacccggcc
tggaaacagccctgcccacccgacatggcccctccagacttcctatatgacctttatgcc
gtgtgtaaccaccacggaggcatgcacgggggacattacacagcgttctgcaggaactca
ttggatgcccagtggtatgggtatgatgacagcagtgcagagccagtcacagagggggag
gtgtgcacacggggagcctacatcctcttctaccagagacgcaacaccatccctccatgg
tcagccagctcctctctcagaggctccaccagctcctccacgtcagaccactggctgatc
cgtctgacgcgggacagtaagaggggcagcctgttctctgaggggtccacctctggccct
cctggccccacaccaacccctgaatccccagagctccctgtgtttgaggacgagcctctt
aaaacagagacagatgggtttgagaataagctatttgtccgaggcactcagggcaggagc
gtgagcatgaggtcacccactaaggacaccctgagcaaagtgttgcccctgcgctggtcc
tttggttccaaggaccgccccaaaccctccgcccccaggcgaggggagctggtggagtac
ctggagtcagggcgcaggccgcggtgcaccaaggaccccatcatcaccctagtggccacc
ccgccccagggcgggcacagggacctgggcagctcccccagtgggagcagcctgagctgc
atggacaggtccaactctgaggcctgcgactccccaagagtaccagagggccagagcagg
cctgccgtagagaggagctccagcctggggctcagtattatcactaaagtcagggatgac
agctcacttggccggaggtcctccaagaggttcaggcaggaccagggcaggaccctggac
cctcacccccatagaggctctactgatggggtccacatcagccacagtgcccccccaagt
agggactccacactgaagagacccaaggcccaagcagggctgacctccagggtaggggta
ctccaggctggtctacagcctgaggagaggaaggggatgaggggtcaggaggtaaggagc
cacgacagcctcttgtcctttttcaaatcaggcttcctgaagaaagatgctcagagtaca
cctagtaagggggaggaagtccgggtcaatggccacggtcgaaccagcaaggtggcaaac
tgtagtttgtctaaactctccctctccaatgggaccctgaacggtgtagcgctggaggaa
aagagggccaacggcgcccctagaagtgactgccgtcacagcaaagggcagcttgtcaac
gggagggcagggagtcacagctctgctgctgacatcaagcgtgcccacagctccagtaac
atccagaccaaactggacttgaccctgcgcaggtgttcctctctgcagaagaacgggcag
gtagctcccccggccccccgcagcagcctggccacagacaagcccagctatgccaccctg
cagcgggcacgctacagcaccacctccctgggcaggcagcagagacccgtccccgagtcc
tgcttctga
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