Oncorhynchus keta (chum salmon): 118364838
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Entry
118364838 CDS
T09424
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118364838
03036 Chromosome and associated proteins [BR:
oke03036
]
118364838
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118364838
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118364838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA
RRM_1
RRM_occluded
Calcipressin
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
118364838
NCBI-ProteinID:
XP_052383730
EnsemblRapid:
ENSOKEG00005005808
LinkDB
All DBs
Position
10:complement(67655257..67746814)
Genome browser
AA seq
2015 aa
AA seq
DB search
MEENKNKKQEKTKKEAAQKQAADTKTRVPEPAKPSPGPLHHPTTSVTLPQASHPPSSSSS
VRTNGKRAPPSTQQTPQQLTPPPPSSSSGPRYPPREVPPRFRQQEHKQLLKRGQPLPAGA
LSSLTVTPASDPLISGAPPSSSSAGKRHTDLPFHSGPGAQHENPHWGALPPTSTTSSSWD
QVIIDGSDTEAWPSISRSSVSRPANPPECATAADCTNPETSSYMSMAAGATSQQAHYPSS
LKANVANVASMMQPSGGQGVGAIGSRGWGSGPGPIPMGPTEGAKPDGLGPNLGRSGGAPS
WNSQPSFSLNLNPNANPSAWPVLGQEGAGGGQNPASLPPNSILGNGSLGGDENNSSSTWG
GMMSPDAPSSNKNVSFSSMEHPNLNTDGQNSHHTKQPLSPIHGLPGWGGQSPTESSQLNG
DAGSSVWGNEDTKTPANSSKNSGWDSAPSGGMSGWGHSGSGSGSGEGGWGGDWGKHSSGG
GEVKGGWDSSDGPAQDQQVSSWGQPTPAPASEGSGSGGSEGRIHRRGQTGSEDGGPPPLP
RQDLDPRVLCNTGWGQTPVRQHTSWEMEEQRAANDRKTSEMRGGGGGDTWRGSNSPSSGS
PLDPRNGGANPSLGPSQRPGSGGPGGKSEGPSGWGGPPPSSWGEQPVNKAPNGSVSGWGD
PMAQGPNTTNNGPKSGGQSWGVPEKSSPTWDDGPAKTQQNQTQSWGEGPKSSSHGWGSGH
GSGSNGSNGSNGGEWREPAEVKKNGSSSHMWEGEGGNGRGGGWKDSPRGGGGNGGGWGSK
PAPAVGGWGETQNQHPNGPAPGWGSKPQECPSGPAPGWGSKPQESPSGPAPGWGSKPQES
PSGPAPGWGSKPQESPSGPAPGWGSKPQESPSGPAPGWGSKPQESPSGPAPGWGSKPQES
PNCNSGGGGPGGGSMGSWGGPASVRQSSNPGWGPGSSGAKPDPAMEPTGWEEPSPPSIRR
KMEIDDGTSTWGDPSAYNKTVNMWDRNNPTGGNGNQGNNPTQPPTNKSSGGLTVNNSHNN
HSSVPPSNNNHHHMNHHHLHHGQPPPHSQHHGNNNGSTNTAAPHQGGGPQGRPPMANPGW
GELPSVQQPKPEPAWGEPAGPSPAVDNGTSAWGKPPGVPGGWGDGGHEPNGPYRRGNNGP
SGPAPCKPALKSMQDGWGGGREEEMGMSSGQWDADAGDVWNSPASQENNSSCNSWGQPPK
KGPPKGKMGNQPDEAWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMSALLEKKTEL
DKRGMGMSDYNNGMNKPLGCRPQALSKDPSSDRSPFLDKDGGLSDDAPPSPFLPSPVSLK
LPLVNNLQPGLALGSPGLNMQNINNRQMQSGMLGSSGAALSRAMQQPPPQPPVPPLGSSQ
PSLRAQVPQFLTPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQ
IQQQMMQAQRNVSGPIRQQEQQVARTINNMQQQIQQHQRQLYQALLMKQQPPGSHSSSGL
HPGQGKSALDSFPGHPQAPGLSDLHTKEPHSSPSSYSPYPLSGLNPNMNVNCMEVGGLSM
KEPPQPQSRLSQWTHPNSMDSLSGNSSHMEANLNKHGAISAASNLGPPGKPPHMDDSYSP
YSMMGGSESPTSPLVPPDSWGQGPGKSPKDQITNGTNINWPPEFCPGVPWKGLQNIDPEN
DPNMTPGSVPSGPTINTNIQDVNRYLLRDRSGGSSPPSPPQNGALPPSADWPVSGCYTSS
FSLSSPDEESAGKLSDMKSTWSPGPISHPSQASLSHELWKVPQGPRNNTAPSRPPPGLTN
PAKPSSTWGGNSLGLAQGWSSSYTSEGTTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLC
MQHGPLITFHLFLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRYFA
QGQQQQLPPTTSWQPNPGTNQTRIGGGSQQHAIGHHWSGGLGGGAKTGGDLLWGGVPQYS
SLWGPPSGDDSRGVIGSPNPINTLLPGDLLSGESM
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaataaaaataaaaagcaagaaaagaccaagaaggaagctgctcagaaacag
gctgctgacacgaaaaccagagtgccagagccagctaagcccagccccggtcccctccac
caccccaccaccagtgtgaccctgccccaggcctcacatcccccctcctcctcctcttca
gtcagaaccaatgggaagcgcgccccccctagcacccagcaaacaccacagcagctgacc
cctccgcctccgtcgtcgtcctcaggcccccgctacccgccccgtgaggttcccccgcgt
ttccgccagcaggagcacaagcagctactgaagaggggccagccactgccagccggagcc
ctgagtagcctcaccgtgacacctgcctctgacccgctcatctccggtgcccccccttct
tcctcctccgcaggcaagcgccacacagacctgcccttccatagtggtcctggtgcccag
catgagaatccccactggggagccttgccaccaaccagcaccaccagtagtagctgggat
caagtgatcatcgacgggagcgacaccgaggcctggccctccatcagtcgcagcagcgtc
agccgaccagcgaatcctccagaatgtgccacagccgctgactgtacgaacccagagacc
agcagctacatgagcatggccgcgggggctactagccagcaggcccactacccctcctct
ctcaaagctaacgtcgctaacgtagcaagcatgatgcagcctagcggtggccagggagtt
ggagccatcggcagcaggggctggggctccggaccaggccccatccccatgggccccact
gagggagccaaacccgacggccttgggcccaacctgggtcggagtggaggagcacccagc
tggaactcccagcccagctttagcctgaacctgaaccccaacgccaacccctcggcctgg
cccgtgctggggcaagagggggctggaggtggccagaaccccgcctcactaccacccaac
agtatcctgggcaatgggagcctgggaggggacgagaacaacagcagcagcacctgggga
ggcatgatgagccctgatgccccgtcctccaataagaatgtgtctttcagcagcatggaa
caccccaaccttaacactgacggacaaaacagccaccacactaagcagcccctcagcccc
atccacgggctgcccggttggggaggccagtcccctactgagtcctcccagctcaacgga
gacgcagggagctctgtctggggcaacgaagacaccaagacacccgctaactcctccaag
aactcaggctgggactcagcaccctccggaggcatgtccggctggggccactctggcagc
ggaagtggcagtggagaaggaggctggggaggagactgggggaagcactccagcggtgga
ggagaggtcaaaggaggctgggattcctcagatggcccagcccaggaccagcaggtgagc
tcctggggccagccaaccccggccccggctagtgagggtagcgggagcggtggcagcgag
gggcgcatccatcgcaggggtcagactggcagtgaggacggaggtccccctcccctgcct
cggcaggacctggacccccgtgtgctctgcaacacaggctggggccagacgcccgtccgc
cagcacacctcctgggagatggaggagcagcgtgccgccaacgataggaagaccagcgag
atgaggggaggcggtggaggggacacatggaggggctccaacagcccctcttctggatcc
ccactggacccccggaacgggggagccaaccccagcctgggaccatctcagaggccaggc
tcagggggccccggaggcaagagtgagggcccttcaggctggggaggccctccaccctca
agctggggggagcagcctgtcaacaaggcccccaacggttccgtcagtggctggggggac
cccatggcccaaggccccaataccacaaacaatggcccaaagagtggaggtcaatcctgg
ggtgtccctgagaagtcctcccctacctgggacgacgggccagccaagacccagcagaac
caaacccagagctggggagaggggcccaagtcctcctcccacggctggggctccggccat
ggaagtggctccaatggatccaacggctccaacggcggagagtggagagaaccggccgag
gtgaagaagaatgggtcctccagccacatgtgggaaggagaaggaggaaatggacgagga
ggagggtggaaggacagccccagagggggtggaggaaatgggggcggctgggggtcgaag
cctgcccctgctgttggtggctggggggagacccagaaccagcatcccaacggcccagca
ccaggatggggctccaagccccaggaatgtcccagcggtccagcaccaggatggggctcc
aagccccaggaaagccccagcggcccagcaccaggatggggctccaagccccaggaaagc
cccagcggcccagcaccaggatggggctccaagccccaggaaagccccagcggcccagca
ccaggatggggctccaagccccaggaaagccccagcggcccagcaccaggatggggctcc
aagccccaggaaagccccagcggcccggcaccaggatggggctccaagccccaggaaagc
cccaactgcaatagtggaggaggtggaccaggaggaggcagcatggggtcctggggcggc
cctgcatctgtaaggcagagttccaaccccggctggggcccggggagctccggagccaaa
cccgacccagcgatggagcccaccggctgggaggaaccctctcctccctccatccgtcgc
aagatggagatcgatgacggcacgtccacctggggagaccccagcgcctacaacaagacc
gtgaatatgtgggaccgcaacaaccccactggaggtaacggtaaccaagggaacaacccc
acccagccgccaaccaacaagagtagcggaggcttgaccgtcaacaacagccacaacaac
cactcctccgtccccccaagcaacaacaatcaccaccacatgaaccaccaccacctgcac
cacggacagcccccgccacacagccagcaccacggcaacaacaatggatccaccaacacc
gccgccccgcaccagggcggaggaccccagggcagaccacctatggccaacccaggctgg
ggggagctgcccagtgtccagcagcccaagccagagccagcgtggggggagcccgctggc
ccctctcctgcagtggacaacggcacctctgcctggggcaaaccccctggtgttcctgga
ggctggggcgatggggggcacgagcccaatggaccctacaggaggggaaacaacggaccc
tctggacctgcaccctgcaagccagccctcaaatctatgcaagacggttggggaggcggg
agggaggaggagatgggcatgtcttctggccaatgggatgctgatgccggagacgtgtgg
aacagccccgcctcccaggagaacaactcctcctgtaactcgtggggccagccacccaag
aagggcccgcccaagggcaagatgggcaaccagccagacgaagcctggatcatgaaccgt
ctcatcaagcagctcacagacatgggcttcccgagggatcctgctgaggaggctctgaag
agcaacaacatgaacctggaccaggccatgagtgctttgttggagaagaagactgaactg
gacaagcggggcatgggcatgtcagactacaacaacgggatgaacaagccgttgggttgc
cgtcctcaggccctctccaaagacccctcctcggaccgcagcccattcctagacaaggac
ggtggtctgtcagatgacgcccccccctcaccgtttctgccttctcccgtcagcctgaag
ctccccctggttaacaacctgcagcctgggctggccctgggctccccggggctcaacatg
cagaacataaacaacagacagatgcagagtggaatgttgggcagtagtggagcagcacta
tcccgggccatgcagcagccgcctcctcagccgccagtgccgcctctcggctcctcccag
cctagtctacgcgctcaagtgcctcagtttctcacccctcaggttcaagcacagctcttg
cagtttgctgcaaaaaacattggtctgaaccctgcacttttaacctcaccaataaaccct
caacaaatgaccctgttgtaccaacttcagcaactgcaaatggcgtaccagcgtttacaa
atccagcagcagatgatgcaagctcagcgcaacgtctccggtcccatcagacaacaagag
cagcaagttgcacgtacaatcaataacatgcagcagcagatccaacagcaccagcgtcag
ctgtaccaggccctgctgatgaagcagcagccccccggctcccactcctcctcaggcctg
caccccggccaaggcaaatcagccctggactcattcccaggccacccccaggctccgggc
ctctccgacctgcacaccaaagagccgcattcttctcccagctcctacagcccctacccc
ctctctggactcaatccaaacatgaatgtaaactgcatggaggtggggggcctgtccatg
aaggagcctccccagcctcagtcccgtctgtcccagtggacccaccccaactccatggac
agcctctctggaaactcctcccacatggaggctaacctcaataagcacggtgccatttct
gctgcttctaatctgggcccccctggaaagcccccccacatggatgactcctacagcccc
tacagtatgatgggtgggtctgagtcccccacctcccccctggttccccctgacagctgg
ggccagggaccgggaaagagccccaaggaccagatcaccaacggaacgaatatcaactgg
cccccagagttctgtccaggcgtaccctggaagggcctgcagaacattgaccctgagaac
gaccccaacatgaccccaggaagtgttcccagcggccccaccatcaacaccaacatccag
gacgtcaaccgctacctactccgtgaccgcagcggaggctcctcccctccttcaccgcct
cagaacggtgctctgcccccctccgcggactggccagtcagtggctgctacactagctct
ttcagtctgtcctccccggatgaggagagtgcaggtaaactatctgacatgaagtccacc
tggtccccggggcccatctcccacccctcccaggcctctctgtcccacgagctgtggaag
gttccccaggggccccgcaacaacacagccccctccaggccacctccgggcctcaccaac
cccgccaagccctcctccacctggggaggaaactccctgggcctggcccaaggctggagc
agctcatacacctcagagggcacaacctggagcacagacagctccaacaggaccagtagc
tggctggtactgaggaacctcaccccccagatagacggctccaccctgcggacgctgtgc
atgcagcacggccccctcatcacattccacctcttcctgacccagggaaacgctgtggtg
cgatacagctccaaggaggaggctgccaaggcccagaagtccctgcacatgtgtgtgctg
gggaacaccaccatcctggcagagtttgctggggaggaggaggtgaaccgctactttgca
caaggccagcagcagcagcttccgcccaccaccagctggcagcctaaccccggcaccaat
cagacgcgcataggcggaggctcgcagcagcacgccattggccatcactggagtggcggc
cttgggggaggagccaagaccggtggagacctgctgtgggggggcgtgccccagtactcc
agcctgtgggggccccctagtggcgatgatagtcgcggcgttatcggaagccccaacccc
attaacacgctgttgccaggcgacctgctgagtggagagtccatgtag
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integrated database retrieval system
