Oncorhynchus keta (chum salmon): 118364873
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Entry
118364873 CDS
T09424
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118364873 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118364873 (nup133)
03036 Chromosome and associated proteins [BR:
oke03036
]
118364873 (nup133)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118364873 (nup133)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118364873 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CHASE3
Motif
Other DBs
NCBI-GeneID:
118364873
NCBI-ProteinID:
XP_035602549
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All DBs
Position
32:5025138..5036518
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AA seq
1140 aa
AA seq
DB search
MFSPRSTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSDALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFAYYADLVSISSPSPLETASVQSISVMAVAPEGTARFWPSLAHEGNYTETV
VDMGENLCNFVVAVRGGSFIVSSYKGQMMRLGTDPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMRAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEVDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISDELSVEVTKYNPPFQSEDALQAMRLMLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPE
ATAIETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPEGDGDGEVGGELD
LVVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILIALRKSNAT
VSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQA
AGQYRDTKASLYRASESTPAEPEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSELR
NGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDRYNTLEMEYTQRRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAYKTLYGQANMETRYFVKKKTLLALSKL
TALASDMPEAVMKKHVDEMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLINLYI
CDDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWLSADGNDDPLEAA
KDSIFVKILLKLIQEGVPLQTYLPDVKDLLQLDEMEALKSKPTFEFVLRANYEHYLQAQI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgttctacccctagttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtccagagctactcaacttcagacgcactccacttc
gatgtccagacgtttggctcttcgctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgcctactatgctgatctcgtctccatatca
tctcccagccctctggagactgccagtgttcagtccatctctgtcatggcggtggctcca
gagggaacagcccggttctggcccagtttggcccacgaggggaattacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagtttcatc
gtgtcatcctacaagggccagatgatgcgcctcgggacggacccctccgggaagctgctg
cagagggcgctacagcagggccagggggtgctctccggcatcggacgccgcgtctccagc
ctgtttggcatgcgcgccccgctcaccaacaacaatctccacagtgttctgtgggtgggc
gagacgggctgcctgtatactctgacctcctgtgggctcagtaaatgggaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggaaggagtgaacgttacc
tacatggacatgcaactgagccaggatggcctggtagtgttggcggcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atttctgatgagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gctctccaggccatgaggctgatgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtaccggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccgtctgcgtggtgggggctgctgtgccaacctg
ccggtgttcttctcccagaacagtggtctggtggccgtggtggccagagagagtgcctcc
atgctgcctgagaccatggaggactccctctgcttctccctggctggggccggccctgag
gcaactgctatagagactccgactaggatggagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgtttctgcagttctgccggaatgacctggtgggggcccagaccatg
acagacgagctgttccccccggagggggacggagacggggaggtgggcggggagctggac
ctggtggtgacccggatcaacctggacctggtggatgactacccagcctcagacccccgc
tgggccgagtctgtccctgacgagagtgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtg
ggtctcctggaccggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgcgagcacgccgagaagctacaggcggccatgacgctgaagaaccaccacgcc
aagcacggcgagctggtcaatcgtgccatcctcattgccttgaggaagagcaacgcaacc
gtgtccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctca
gtctttgagtgtctactagaagaggaggagaggactttgaaggagaaccctgtggactct
gtgaagtgggctgaagtggtgctcagtgtcaacactatcatcaaggacatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcacccctgcc
gagccagaatacatcccatggaccgcctctagcggtctgggaggggttcgcaccgtcatc
gcccgccagcacgaggtgatcctgcgtgacgtgtaccctcacgccgactctgagctgcgc
aatggcctgaacgagcagctggcagcgctgctggacgtgctcctgggaggctacgttgcc
cagctgacctcactgagaccgggccgcccgggccagcaggaccgctacaacaccctggag
atggagtacacgcagcgccgctctgaactgctcgcaccactgttggaactgggtcagtac
cagtgggtggcggcactggcagagaagtactgtgactttgacatcctggtccagatgtgt
gagcagactgacaaccaaaacagactgcagcactacatggccaagttcgccgaccagaac
tttgcggacttcctgttccgctggtacatggagaaggggaagaggggcaagctgctctcc
cagcccatcgcccagcaccagcagctggccagcttcctgcagtcccacgaacacctcagc
tggctgcaccacatccacgtccatgacttcagcagtgcttacaaaaccctgtatggccag
gccaacatggagacacgttactttgtgaagaagaagaccctgttggctctcagtaaactg
actgccctggcatcagacatgcctgaggctgtgatgaagaaacatgtagacgaaatggtc
gagcaggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaa
caacagaaccccgacaccatgcccctgctcagcgctcacaaccttattaatctgtatatt
tgtgatgacaaccgacgagccaatgagtatgacttcaagaaggctctggatctactggag
tacatagacgaggaggacgctgtggacattgagggactcaagtgtgagatcttctgcaag
gccctcaagaaagacgattggttgtctgctgatgggaacgatgaccctctggaggcagcc
aaggacagcatttttgtcaagatcctcctcaagctgatacaagaaggtgttcctctacag
acctaccttcctgacgtcaaagaccttcttcagctggatgagatggaggctttgaaatca
aagcccacttttgagtttgtactgcgggccaactatgaacattacctgcaagcacagatc
tga
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