KEGG   Oncorhynchus keta (chum salmon): 118364887
Entry
118364887         CDS       T09424                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 10-like
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    118364887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oke02000]
    118364887
Transporters [BR:oke02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    118364887
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N MTABC_N AAA_16 MMR_HSR1 AAA_29 AAA_22 RsgA_GTPase DUF87 Dynamin_N nSTAND1 KAP_NTPase
Other DBs
NCBI-GeneID: 118364887
NCBI-ProteinID: XP_035602573
LinkDB
Position
32:complement(5238241..5253548)
AA seq 1549 aa
MGRGVVAVFGPSELFSGLCHTDTLDPFPVWRDGAISPCFNQLVLGALAHAVVAVFSAIYL
SAQRCSLLRSSPPCGWGLRVASALLVTLLFVVDLVLVVLLHRGDMYLDILADGCAILAWL
VHFGALLVLQRSIYRRTRGPSVLLLLVLLPIPNLVVTLLAYAHEATFLDLAEPFRVVRLV
LAVTRGLXLLVYLLAFAAPCVGEGSYTSMSVNDADSSLLIPESSYQDTGEVVAEDGSSII
SRLMYLWLNPLLRLGRRGELERPCNVYLLPRRLRTSAVRRHFLRCWEDCQQRAATQRRNT
TPRPANKSLQNRTWSSPLQEGIAVEEVGLLKVLHKAFGLRYYLLGVLKLAGNMLSFAGPL
LLSSLVHYMEEEGAPVSQGAWCATGLFFSTFFSALIRNIFSFEVSKVSLSARAALISAIY
GKALRVSGGSLAARFTLGEVVNFMSTDTDHVINFFNNFHEVWSLPFQFSIALYLLYLQVG
VAFLGGLGVALLLVPLNKVLASKIMENNKHMLTHKDSRVKLMTEVLFGIRVIKFYNWEAY
FAQKIADFRRQELSHLKAIKYLDAVCVYTWGSLPIVISIITFVTYVLLGHELTAATVFTT
LALVGMLIVPLNSFPWVLNGILEAKVSLDRIQRFLKLPNQDLDAYFSLVAPGDPQDTIVM
SQGIFSWQGPGGPDHPTSSDTESPKGSLMLHSLNLSITKGSLVVVVGKVGCGKSSLLAAI
TGELNRRGGDVYVQGREDGFGLAAQEPWIQHATVRDNILFGKDYNSSFYQAVVEACALTD
DLNILPNGDRTEVGENGVTLSGGQKARLALARAVYMEKDIFLLDDPLAAVDSDVAHHLME
RCIMGILRSKTRILCTHRIEFVDKADVVILMDNGTIIKTGTPEEVLPLVEAVPKNRKNDS
NAKEKDVIEREEKQGPSNELFAEEESTLSREEQKAVGGLAWKVYHTYWRAVGGPLAVSIL
LSLLLMQASKNVSDWWLSHWISNLKNNGSAQSVLMPAYSSPHLLLFSPGGLMFPVNIMET
TAFANMSSEVKFYLTVYSSIAGANTVFTAFRAFLFAFGGIRAALVIHNRLLDTVLKATVT
FFDTTPLGRILNRFSSDLYSVDDTLPFFLNILLASIFGLLGMLVVMSYGLPWFLVALLPL
GLLYHLTQRFYRHTSRDLKRLCSLTLSPVYSHFSETLSGLGTIRASSSASRFEEENERRL
EQNQRCLFLSNAAMQWLDIRLQMIGVVVVTGISVIAVVQHQFKSIDPGLVGLSLSYALSI
TGLLSGLIFNFTQTEMQLVSVERTEEYSTTLPTEPQHSNPQVPTSWPEQGWVEFRGAVLS
YREGLPNALDGVSLVVRPGEKVGVVGRTGSGKSTLFLALFRMVELNQGQILLDGVDTSQV
GLAQLRSKLAIIPQDPFLFSGTVRENLDPCGRHPDPRLLEALEHCHLSPVINHIGGLGAE
VGERGKSLSLGQRQLLCLARALLTEANILCIDEATASVDQKTDKLLQQTIREKFQDKTVL
TIAHRINTIMDSDRVLVMHSGKVVEFDTPADLCQRDDSIFCKLVGGRGE
NT seq 4650 nt   +upstreamnt  +downstreamnt
atggggagaggtgtggtggctgtttttggccccagtgagttgttctctggcctctgccac
acggacacccttgacccgttcccagtgtggcgggatggagccatcagcccctgttttaac
cagctggttctgggagccctggctcacgctgtagtggccgtcttcagtgccatctacctg
agtgctcagagatgcagcctcctccggtcctctcccccgtgtggttggggcctcagggtg
gcctcagccctgctggtgaccctgctcttcgtggtggacttggtcctggtggtcctcctc
caccggggggacatgtacctggacatcctggctgatggatgtgccatcctggcatggctg
gtccactttggggccctgcttgtcctccagaggtccatctatagaagaaccaggggtccc
tctgtgttactactgctggtcctgttgcctatccctaacctggtggtcaccctgctggct
tacgcccatgaggccaccttcctggacctggcggagccctttagagtggtacggctggtg
cttgcagtcacccggggactcnntctccttgtctacctcctggccttcgctgctccctgt
gtcggtgaagggagttacacctccatgtccgtcaatgatgcagacagctctctcctcatc
ccagagagttcctaccaggacacgggagaggtggtggcagaggatggcagtagcatcatc
tcccgcctgatgtacctgtggttgaaccctctactgaggctcggccggcgtggggagctg
gagaggccatgcaatgtctatctccttccccggaggctccgcaccagtgcagtgcgccga
cacttcctccgctgctgggaggactgccaacagagggcagcaacacagagaaggaacact
acacccaggcctgcaaacaagagcctacagaacagaacatggtcttcacccctccaggag
ggtatagcagtggaggaggtaggactgttaaaagtgttgcacaaagccttcgggctacgc
tactacctgcttggtgtgctgaagctagcgggcaacatgctgagcttcgcaggacccctg
ctcctcagcagcctggtgcactacatggaagaggagggggcccccgtcagccagggggcc
tggtgtgccacgggcctcttcttcagcaccttcttctctgccctcatccggaacatcttt
tccttcgaagtctcgaaggtctcactctcagcgcgcgccgccctcatctcagccatctac
gggaaagcactgcgggtcagcggcggcagcctggcagcgcggttcaccctgggcgaggtg
gtcaacttcatgagcacggacacggaccacgtgatcaacttcttcaacaatttccacgaa
gtgtggagtctgcccttccagttctccattgccctctacctgctctacctgcaggtgggt
gtggccttcctaggaggactgggtgtggctctgctgctggtgccgctcaataaggtgctg
gcctcgaagatcatggagaataacaagcacatgctcacacataaggatagtcgtgtcaag
ctaatgacagaggtcctctttggaatacgagtcatcaagttctacaactgggaggcctac
tttgcccagaagatagcagattttcggaggcaagagctgtcccacctcaaggccattaag
tacctggacgctgtgtgcgtgtacacctggggatctctacccatagtcatatctatcatc
acctttgtcacatacgtgctgctcggccatgagctcactgcagccacggtgttcaccact
ctggccctagtgggcatgctgatcgtccccctcaacagcttcccctgggtcctcaacggc
atcctggaggccaaggtgtccctggaccgcatccaacgcttcctcaagctgcccaaccag
gacctcgatgcatatttcagtctcgtggcccctggggacccccaggacaccattgtgatg
agtcagggcatattctcatggcaggggcctggggggccagatcaccccacaagctctgat
actgaatcccccaaaggaagtctgatgctccatagcctcaacctatccatcactaaggga
tccctagttgttgtggtgggcaaggtgggctgtgggaagagctccttactggcagccatc
actggagaactcaaccggcgtggaggtgatgtatacgtccagggcagggaggatgggttt
ggtctcgccgctcaggagccgtggatccagcatgcaacagttcgggacaacatcctgttt
ggcaaggactacaacagttctttctaccaggctgtggtggaggcctgtgcgctcacggac
gacctcaatattctgcctaatggggacaggaccgaggtgggagagaacggagtgactctg
agtggaggacagaaagctcgcctggccttggccagagctgtttacatggagaaagacatt
ttcctcctggacgatccactggcagcagtagactctgacgtggcccatcacctcatggag
agatgcatcatggggatcctcaggagcaagaccagaatcctatgcacccaccgcatagag
tttgtggacaaagctgatgtggtgattctcatggacaatggaacaattattaaaacgggt
acacctgaagaggtccttcctttggtcgaagcagtgcccaagaaccggaagaatgacagt
aatgcaaaggagaaagatgtcattgagcgagaggagaagcagggtccatccaatgagctg
tttgcggaggaggagtctacactatcaagggaggagcagaaggcggtgggcgggctggcc
tggaaggtttaccacacctactggagagcggtaggagggcccttggctgtctccatcttg
ctgtccctactcctcatgcaagcctctaagaatgtgtctgactggtggctgtcccactgg
atctctaacctgaagaacaatggttccgcccagagtgttctcatgcctgcctacagctca
ccacacctgctgctattctctcctggaggactaatgttccctgtcaatattatggaaacg
acagctttcgccaacatgagctcggaggtgaagttctatctgacagtttactcttccatt
gcgggtgccaacacggtcttcaccgccttccgagccttcctcttcgcctttggaggcatc
cgtgcagcattggtcatccataacaggctgcttgacacagtcctcaaggctacagttacc
ttcttcgacactacaccgctgggccgcatccttaaccgcttctcctccgacctgtacagc
gtggacgacactctccctttcttcctcaacatcctgctggctagcatcttcggcctgctg
ggcatgctggtagtgatgagctacggcctgccctggttcctagtggccctgcttcccctg
ggcctgctctaccacctcacacagcgcttctaccgacacacatccagagacctgaagcgt
ctgtgcagcctcaccctctcgccggtgtattcacatttctctgagacgctgagtggcctc
ggtaccatccgagcaagttccagtgcctccagatttgaggaggagaacgagaggcgtctg
gagcagaaccagcgctgtctgttccttagcaacgccgccatgcagtggctggacatccgc
ctgcagatgatcggcgttgtcgtggtgacgggcatcagcgtgatcgccgtcgtccagcac
cagttcaaatccatcgacccgggtctggtgggtctgtccctgtcctatgctctgtccatc
acaggcctgctgtcaggcctcatcttcaactttacccagacagagatgcagctggtgagt
gtggagcgcaccgaggagtactccaccaccctgcccactgagccacaacacagcaaccca
caggtgcccacctcgtggccggagcagggttgggtggagttccgtggggccgtgctgtcc
tacagagaggggctgcccaacgccctggacggggtgagcctggtggtccggcctggggag
aaggtgggggtggtaggccggacgggctcaggcaagtcgaccctgttcctggccctcttc
cgcatggtggagctgaaccagggtcagatcttactggatggagtggacaccagccaggtg
ggactggcccagctcaggtccaaactggccatcatcccccaggaccctttcctgttcagc
gggacagtgcgagagaacctggacccatgtggacgtcaccctgacccccggctactggag
gccctggaacactgtcacctcagccctgtcatcaaccacatcggtggtctaggtgctgag
gtgggagagcggggcaagtctctctctctgggacagagacagctgctgtgtctggccagg
gctctgctgactgaagctaatatactgtgtattgacgaagctacagccagcgttgaccaa
aagactgacaaactgctacagcagacaatcagagagaagtttcaagacaagaccgtcctc
accattgcccatagaatcaacaccatcatggactcagacagggtgctggtgatgcattct
gggaaggtggtggagtttgatacccctgctgatctgtgccaaagagacgactccattttc
tgcaagctggttggtgggaggggagagtga

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