KEGG   Oncorhynchus keta (chum salmon): 118364932
Entry
118364932         CDS       T09424                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03015  mRNA surveillance pathway
oke03040  Spliceosome
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118364932
  09122 Translation
   03013 Nucleocytoplasmic transport
    118364932
   03015 mRNA surveillance pathway
    118364932
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118364932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118364932
   03041 Spliceosome [BR:oke03041]
    118364932
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118364932
    TREX complex
     118364932
Spliceosome [BR:oke03041]
 Complex C
  Other components
   EJC/TREX
    118364932
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    118364932
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_10
Other DBs
NCBI-GeneID: 118364932
NCBI-ProteinID: XP_035602649
LinkDB
Position
32:complement(6109192..6112039)
AA seq 273 aa
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGSRGR
GRGGRGGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq 822 nt   +upstreamnt  +downstreamnt
atggctgataaaatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcgaggtgggagtgga
gggcgacccggtggcgctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtggtggtgtagagactggtggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaatttggtacattg
aagaaagcggctgtgcattatgaccggtctggccgcagccagggaaccgccgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacatcacaaatcagagacgataaccagagacga
ccttcacagagttcaaatggaggcggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggctccaggggcagg
ggtagaggcggacgtggtggtggaggcaaaccgcagcagttgtctgctgaagagctggat
gcccagttggatgcgtacaatgccaagatggagactagttag

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