Oncorhynchus keta (chum salmon): 118364936
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Entry
118364936 CDS
T09424
Symbol
pecam1b
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04148
Efferocytosis
oke04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118364936 (pecam1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118364936 (pecam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118364936 (pecam1b)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118364936 (pecam1b)
04091 Lectins [BR:
oke04091
]
118364936 (pecam1b)
CD molecules [BR:
oke04090
]
Proteins
118364936 (pecam1b)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118364936 (pecam1b)
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118364936 (pecam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_C17orf99
V-set
Ig_C19orf38
Zwei_Ig_N
GDU_TM
ICAM_N
Motif
Other DBs
NCBI-GeneID:
118364936
NCBI-ProteinID:
XP_035602655
LinkDB
All DBs
Position
32:complement(6144315..6163738)
Genome browser
AA seq
777 aa
AA seq
DB search
MWEPQQPSVRMVTRLLLLTSALLSTCQAAESPALFTSVTLTLEPSNAVSQGTNLTVRCKA
LVSSSGFLNRKYTIYKDNTVVYTESITTAEDLIYSLRMARVANTGKYKCKVNIPGKELSS
SSEKLTVTGLQTPVLSVDKRVFSEGEEVTVGCKAPGESGVIVFYFYKDSKELYEERVDAN
HVETRLRFNNAGDHRLHCDYRVILLTDSVPSNASNNVVVTVKELFITPIISVRPHGSMII
EGDNLDISCGVSGNLQNSSGLKVFLSKGPTLLSSGQSKANHSMRALAEHSGEFQCSLEVG
NVVKRATENVRITELFSQPVLTMYPTEVFEREKITLTCKSTNYSSDRISASDVKYSIYKD
NYTLTPGSFNGIYVVPGVVPNSSGIYSCKADARMISKYSAKLPVQAKVLVSKPEITAIGR
VIVGKPFQVRCHSDRGSLPIEYTLWKKYSEVNSTTVQQPHHQAIFTVTVQHYSDMQDYKC
EARNNPKIDTVVSNKLNTTVIVPLSNPGLSVVPDLLEVTEGNEMYLICGVEGSPPVTFKW
YRRGNVQPLFITTSIQSSASHLIKGVGNEDSGTYYCEAINYANMVRSQPVTVDVKMAMWK
KGLIVACCLLVVALLALACVLRYNSKRGKRENAAELSVKPSSPKSDDSLTVSLTHSTMEV
YNPPEVGVDAAVSVWSERPVDPGSDGESSAASNNEPDVEYTEVVHRQPVDPARAPLRKGT
ETVYSEVQNSPTGAPGDHYDYQGSVEYADLNGDQPEVNQALLEVNHQDHHDLPVPVE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagccccagcagccctctgtcaggatggtcacccgactactactgctaacctcc
gcactcctctccacctgtcaagcggcggaatctccggcattgttcacaagtgtcaccctg
actctcgagcccagcaacgccgtctcccagggtaccaacttgacggtacgctgcaaggcc
ttggtcagcagctctgggttcctgaaccgtaaatacaccatctacaaggacaacaccgtg
gtgtacacggagagcatcaccaccgcagaggacctcatctactctctccgcatggccaga
gtggccaacactgggaagtacaaatgcaaggtgaacataccgggcaaggagctaagcagc
agctctgagaaactgactgtgacaggcctgcagacgccagtcctcagcgtcgacaagcgg
gtgttcagcgagggagaggaggtgaccgttgggtgtaaggcccctggggagtccggcgtt
atcgtcttctacttctacaaggactccaaggaactctatgaggagagggtcgacgccaac
catgtggagactaggctgcgattcaacaacgctggcgaccacaggctacactgtgactac
agggtcatactcctgacagactcggtcccgtccaatgccagcaacaatgtggtggtcact
gtaaaagagctgttcatcacacctataatctctgtccgaccacacggatcaatgatcatc
gaaggggacaatctggacatctcctgcggtgtcagtggtaacctccagaacagctctggg
ctcaaagtcttcctgtccaagggaccgactctgctgagttctggtcaaagtaaagccaac
cacagcatgagagcactggccgagcactctggggagtttcagtgctctctggaggtggga
aatgtggtcaagcgagcgacggaaaacgtgaggattacagaactgttttcccagccagtt
ctgaccatgtatccgacagaggtctttgaaagggagaaaatcacgttaacctgcaagagt
accaactactcctctgacagaatcagcgcttcggatgtgaaatactccatttacaaggac
aattacacactgacgccaggcagcttcaatgggatatacgttgtccccggggtggtaccg
aactcgagtgggatttattcatgtaaagcagatgccaggatgatctccaagtacagtgca
aagctgcctgtccaggcaaaagttcttgtcagtaaaccggagataacggccattggcaga
gtgatcgtgggaaagcccttccaggtgcgctgtcactcagaccgaggcagcctacccatc
gagtacaccttgtggaagaagtattctgaggttaactcgaccaccgtgcagcagccgcac
catcaggccatcttcactgtcaccgtccagcactacagcgacatgcaggactataaatgc
gaggcgcggaataaccccaaaatcgacacggtggtcagcaacaaactcaacaccacagtc
atagtgcctctgtccaatccaggactcagcgtcgtcccagacctgttggaggtcaccgag
ggaaatgagatgtacctgatctgtggggtggaaggttccccgcccgtcacctttaagtgg
taccgacgtgggaacgtccagccgctgttcatcaccacctcaatccaatccagcgcgtcc
cacctgatcaagggagtggggaacgaggacagtggcacctactactgcgaggctatcaac
tacgctaacatggtccggagtcagccagtcaccgtagatgtgaaaatggcaatgtggaag
aaaggtttgatcgtggcctgctgtctgctagtggtggctctcctagccctcgcctgcgtg
ctgcgctacaattccaagagaggtaaacgagaaaacgcagctgaactgtcagtaaagcct
tcgagccctaaatcagatgactctctaacagtgagtcttacccacagcactatggaggtt
tataacccgcccgaagttggagtggatgctgctgtaagtgtctggagcgagaggccggta
gacccaggcagtgacggggagagcagtgcagcgtccaataatgagcctgatgtggagtac
acggaagtggtacaccgtcaaccagtggaccctgccagagctcccctgagaaaaggcaca
gaaacggtgtacagtgaagtccagaactccccaacaggtgcacctggtgaccattatgac
tatcagggttcagtggagtacgccgatctcaacggtgaccaaccggaggtcaaccaggcc
ctgctggaggtcaatcaccaggaccaccatgacctcccagtgcctgtggagtaa
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