Oncorhynchus keta (chum salmon): 118365092
Help
Entry
118365092 CDS
T09424
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke00514
Other types of O-glycan biosynthesis
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118365092
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118365092
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118365092
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118365092
Glycosyltransferases [BR:
oke01003
]
O-Glycan biosynthesis
O-linked Gal type
118365092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
DUF6492
Motif
Other DBs
NCBI-GeneID:
118365092
NCBI-ProteinID:
XP_035602932
LinkDB
All DBs
Position
32:complement(15335340..15364380)
Genome browser
AA seq
609 aa
AA seq
DB search
MHRYIFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAVWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSAREMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSAHMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEISERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEHFEERDLKAFSAEPL
LVFPTHYTGDSGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccaccgccctgacgttactgttctccggaccagct
caaggatacttccccgaagaacgctggagccccgaatcaccacttcttgcccctcgggtc
ctcattgcccttgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcagtttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaagtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacgtgatgaagctgcggcaggcagcactggactccgca
agagaaatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
cctgcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagttggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtctttgccttctccgctcac
atggcagatgtgcagatgttcctatgtaacagagagacgtatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaacccgcatgtgctgccttcggagtacatcccggcccccgtaaagata
caagataagctgggctttgatgaggtgttcatgatcaacttaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccataccacggtaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatctcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcagaaagaggatgcaggtg
gaccgccctgagaagtccgtacccaatatacacaacctggtggaggccgactactcctat
tggacgctgggttatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtggatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcactttgaggagcgggacctgaaggccttctcggccgagcccctg
ctagtgttccccactcactacacaggagactcgggctacatcagcgacacagagacctct
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggatgaactatga
DBGET
integrated database retrieval system
