Oncorhynchus keta (chum salmon): 118365182 Help Entry 118365182         CDS       T09424                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04510   Focal adhesion oke04512   ECM-receptor interaction oke04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118365182  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118365182   09142 Cell motility    04820 Cytoskeleton in muscle cells     118365182  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oke00536]     118365182 Glycosaminoglycan binding proteins [BR:oke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118365182 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  118365182 NCBI-ProteinID:  XP_035603055 LinkDB All DBs Position 32:complement(17553404..17574631) Genome browser AA seq 1449 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDRTAGSCTLDGQFYNDRDVWKPEPCQICVCDSGT VMCDEVICEDTSDCPNPVIPHDECCPICPDDGFQEPKVEGPQGDRGAKGEPGPAGFPGND GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSGGGMSMPGPMGPMGPRGPPGPPGS SGPQGFTGPPGEPGEAGSSGPMGPRGPAGPPGKNGDDGESGKPGRPGERGASGPQGARGF PGTPGLPGIKGHRGFSGLDGAKGESGPAGPKGEGGASGENGAAGAMGPRGLPGERGRAGP NGAAGARGNDGAAGAAGPPGPTGPAGAPGFPGGPGAKGEVGAQGARGGEGPQGSRGEAGN PGPAGAAGPAGNNGADGNPGTKGAPGSSGIAGAPGFPGPRGPPGPQGAGGAPGPKGNTGE VGANGAKGEAGAKGESGPAGVQGPAGPAGEEGKRGGRGEPGGAGARGAPGERGAPGSRGF PGSDGASGPKGGPGERGGAGVAGAKGNTGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGP SGAGGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPGGAVGAPGKDGD VGAPGAPGVAGPSGERGEQGAGGPPGFQGLPGPQGAIGETGKPGEQGLPGEGGAPGAAGS RGDRGFPGERGAPGPSGPAGARGSPGSAGNDGGKGEAGAAGAPGGQGPPGLQGMPGERGA GGLPGLKGDRGDQGVKGAEGASGKDGVRGMTGPIGPNGPAGSPGDKGETGAPGPGGPSGA RGAPGERGESGAPGPAGFAGPPGGDGQPGAKGEAGDNGAKGDSGAQGPAGPTGAPGPQGP AGNTGAKGARGAAGPPGATGFPGAAGRVGPPGPSGNNGPPGPPGPGGKEGQKGNRGETGP AGRPGELGAAGPPGAQGEKGQPGGDGPNGPSGTPGPQGIGGQRGIVGLPGQRGERGFPGL AGQLGEPGKQGPGGPSGERGPPGPMGPPGLAGAPGESGREGTPGNEGSSGRDGAAGPKGE RGESGAAGASGAPGPPGAPGPVGPAGKSGDRGESGPAGPAGIAGPAGPRGSSGPAGARGD KGEAGEAGERGMKGHRGFTGMQGPSGPSGPSGESGPAGASGPAGPRGPSGSAGAAGKDGM SGLPGPIGPPGPRGRSGEMGPSGPPGPPGPPGPPGPPGGGFDMGFIAQPAQEKAPDPFRH FRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTKKNPARTCRDLKMCHPDWKSGEYW IDPDQGCTQDAIKVYCNMETGETCVYPTEAEIPKKSWYTSKNIKEKKHVWFGEAMTDGFQ FEYGSEGSSAQDVNIQLTFLRLMATEASQNITYHCKNSIAYMDQQSGNLKKSLLLQGSNE IEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFG IEVGPVCFL NT seq 4350 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctcagcgcaacagtgcttttggca agaggacaaggcgaggacgatcgcaccgccggcagctgtacgttggacggtcaattctac aacgacagagatgtctggaaacccgagccatgccagatctgcgtgtgcgatagcggcacc gtcatgtgcgacgaagttatctgcgaggacacatccgactgccccaatccagtgatcccc cacgacgaatgctgccccatctgccccgacgacggcttccaggagccaaaggttgaggga ccccagggtgatcgtggagccaagggagagccaggacctgctggtttccccggcaacgat ggtattcccggccagcccggccttcctggacccccaggcccccctggaccccctggtctt ggcggaaacttctcccctcagatgtctggtggttttgatgagaagagcggcggtggcatg tccatgcccggccccatgggccccatgggtccccgtggtcccccaggacctcctggctca agtggacctcagggtttcactggcccccctggtgagcctggtgaggctggttcttctggt cccatgggcccccgtggtcctgctggtccccctggcaagaacggagatgatggtgagtct ggcaagcctggtcgccccggtgagcgtggagcttccggcccacagggagctcgtggattc cccggaacccccggccttcccggcatcaagggacacagaggattcagcggtcttgacgga gctaagggagagtctggccctgctggacccaagggagagggtggtgcatccggggagaac ggagccgctggagccatgggaccccgtggtctgcctggtgagagaggccgtgctggtccc aacggagctgctggtgctcgtggtaacgatggtgctgctggtgctgctggtcctcctggc cccactggccccgctggtgcccctggtttccccggtggccctggagccaagggagaggtt ggtgcccagggagctcgtggtggcgagggaccccagggatcccgtggagaggctggtaac cccggacccgctggcgctgctggccccgctggaaacaacggtgctgacggaaaccccggt accaagggtgcccctggttcttctggtattgctggtgctcctggcttccctggaccccgt ggaccccccggaccccagggtgctggtggagctcccggacccaagggtaacactggtgag gttggtgctaatggagccaaaggagaggctggtgctaagggagagtctggccccgctgga gtccagggacccgccggccctgctggtgaggaaggcaagcgaggaggccgtggtgagccc ggtggtgctggtgcccgtggagcccccggcgagcgcggtgcccctggtagccgtggtttc cctggttctgatggagcttctggccccaagggtggccctggtgagcgtggtggtgccgga gttgctggagctaagggtaacactggtgagcctggccgcaacggcgagcctggtatgcct ggatccaagggtatgactggtagccctggcagccccggtcccgatggcaagactggcccc tctggtgccggtggtcaagatggtcgccccggacctcccggccccgttggagccagaggc cagcccggagtcatgggattccccggacctaagggagccgcaggtgagggtggcaagcct ggtgagagaggagtcatgggacccggtggtgctgttggtgctcccggcaaggatggtgat gttggtgctcctggtgctcccggtgttgccggaccttctggagaacgaggcgagcaggga gccggtggcccccctggattccagggactgccaggaccccaaggcgctattggtgagact ggaaagcccggagagcagggtcttcccggtgagggtggtgcccctggtgccgctggatcc agaggtgacagaggtttccccggtgagcgtggtgccccaggcccatctggacccgctggt gcccgtggctctccaggctctgctggtaacgatggtggtaagggagaggctggtgccgca ggtgcccccggtggccaaggaccccctggcctgcagggaatgcccggagagcgtggtgct ggtggtctgccaggcctgaagggagacagaggtgaccaaggagtcaagggtgctgagggc gccagtggtaaggatggcgtccgtggtatgactggccccattggacccaacggccctgct ggatctcctggtgacaagggagagactggcgctcctggacctggtggaccttctggtgcc cgtggtgcacctggtgagcgcggtgagtctggcgcccctggacccgctggattcgctggg cctcctggtggtgacggtcagcctggtgctaagggagaggctggagataacggtgccaag ggtgacagtggtgctcagggacccgctggacctacaggagcccctggacctcagggtccc gctggaaacaccggagctaagggcgcccgtggtgctgctggtccccctggtgccactggt ttccccggtgctgctggtagagttggacctcctggcccatctggcaacaacggacccccc ggacccccaggccctggtggaaaggaaggacagaagggtaaccgtggtgagactggcccc gccggtcgtcctggtgagctcggcgctgccggaccccctggtgcccagggagagaaggga cagcctggtggagatggtcccaatggaccctctggaactcccggacctcagggtatcggt ggacagcgtggtattgttggtctgcccggacagagaggcgaacgcggtttccccggcctc gccggacaactgggagagcctggcaagcagggacctggtggcccctctggtgagcgtgga ccccccggacccatgggaccccctggactggctggagcacctggtgagtctggtcgcgag ggaactcctggtaacgagggatcttctggtcgcgatggtgctgctggacccaagggagag cgtggtgagtctggtgccgctggtgcttccggtgcccccggaccccctggtgcccctgga cccgttggccctgctggaaagtctggtgaccgtggagagtctggtcctgctggccccgct ggtattgctggccctgctggtccccgtggctcatcaggacccgctggagctcgtggagac aagggagaggctggcgaggctggagagagaggcatgaagggacatagaggattcactggc atgcagggaccctctggcccctctggaccatctggagagtcaggacctgctggagcctct ggccccgctggacctagaggaccttctggatctgctggtgccgccggtaaggatggtatg agcggtctgcccggccccatcggacctcccggaccccgtggtcgctctggagagatggga ccctctggaccccctggccctcccggtccccctggcccccccggacctcccggcggtgga ttcgacatgggcttcattgctcagcccgctcaggagaaggcccccgatcccttccgtcac ttccgcgccgacgacgccaacgtgatgcgcgaccgcgacctggaggttgacaccactctc aagagcctgagccagcagattgagaacatccgctctcccgagggcaccaagaagaacccc gcccgcacctgcagagacctgaagatgtgccaccccgactggaagagcggcgagtactgg atcgaccccgaccagggctgcacccaggacgccatcaaggtttactgcaacatggagacc ggcgagacctgcgtctaccccaccgaggcagaaatccccaagaagagctggtacaccagc aagaacatcaaggagaagaagcacgtctggttcggcgaggcaatgaccgatggcttccag ttcgagtatggcagcgagggttccagcgctcaggatgttaacatccagctgaccttcctg cgccttatggccactgaggccagccagaacatcacataccactgcaagaacagcatcgcc tacatggaccagcagtccggcaacctcaagaagtccctgctgctccagggctccaacgag atcgagatcagagccgagggcaacagccgcttcacatacagcgtcaccgaggacggctgc acgtcgcacaccggtgcatggggcaagacagtcatcgattacaagacaacgaaaacatcc cgtctgcctattattgacatcgctcctatggacgttggtgcacccaatcaggaatttggc attgaagttggcccagtctgcttcttgtaa

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