Oncorhynchus keta (chum salmon): 118365250
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Entry
118365250 CDS
T09424
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03266
Virion - Herpesvirus
oke04081
Hormone signaling
oke04145
Phagosome
oke04148
Efferocytosis
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118365250
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
118365250
04512 ECM-receptor interaction
118365250
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118365250
04148 Efferocytosis
118365250
09144 Cellular community - eukaryotes
04510 Focal adhesion
118365250
09142 Cell motility
04820 Cytoskeleton in muscle cells
118365250
04810 Regulation of actin cytoskeleton
118365250
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118365250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118365250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118365250
04515 Cell adhesion molecules [BR:
oke04515
]
118365250
04090 CD molecules [BR:
oke04090
]
118365250
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118365250
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118365250
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin beta subunits
118365250
CD molecules [BR:
oke04090
]
Proteins
118365250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
118365250
NCBI-ProteinID:
XP_052346798
LinkDB
All DBs
Position
32:complement(20347651..20368243)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGELEFPFSTISVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGEYRLSDQGNCSPKPDDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggagctagag
ttccccttcagtaccatcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggttggcgtggggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtgatg
ccactctaccagaactacagccagctgatccctggcaccacggttggaacgctgtcggat
gactccgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaatgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggcaaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgaatgtgccgac
ggagagtacaggctctcagaccagggcaactgcagccccaaacctgatgaccccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccaatgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacttgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttttatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgtcctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaacacttga
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integrated database retrieval system