KEGG   Oncorhynchus keta (chum salmon): 118365250
Entry
118365250         CDS       T09424                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03266  Virion - Herpesvirus
oke04081  Hormone signaling
oke04145  Phagosome
oke04148  Efferocytosis
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
oke04810  Regulation of actin cytoskeleton
oke04820  Cytoskeleton in muscle cells
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    118365250
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    118365250
   04512 ECM-receptor interaction
    118365250
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118365250
   04148 Efferocytosis
    118365250
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118365250
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118365250
   04810 Regulation of actin cytoskeleton
    118365250
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118365250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118365250
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118365250
   04515 Cell adhesion molecules [BR:oke04515]
    118365250
   04090 CD molecules [BR:oke04090]
    118365250
Membrane trafficking [BR:oke04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118365250
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118365250
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin beta subunits
   118365250
CD molecules [BR:oke04090]
 Proteins
  118365250
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 118365250
NCBI-ProteinID: XP_052346798
LinkDB
Position
32:complement(20347651..20368243)
AA seq 787 aa
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGELEFPFSTISVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGEYRLSDQGNCSPKPDDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNT
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggagctagag
ttccccttcagtaccatcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggttggcgtggggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtgatg
ccactctaccagaactacagccagctgatccctggcaccacggttggaacgctgtcggat
gactccgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaatgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggcaaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgaatgtgccgac
ggagagtacaggctctcagaccagggcaactgcagccccaaacctgatgaccccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccaatgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacttgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttttatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgtcctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaacacttga

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